RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 ACAD9Q9H845 621 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 HOMER2Q9NSB8 354 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 RIPK3Q9Y572 518 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 TACC3Q9Y6A5 838 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 MCM3APO60318 1980 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 LAMA3Q16787 3333 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 DNAJC25-GNG10A0A024R161 153 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 A0A1W2PQ45 241 aaPredicted RBP11.62□□□□□ -0.55
CCDC170-202ENST00000537358 A0A1W2PQY0 241 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 MOXD2PA6NHM9 499 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 DCDC2CA8MYV0 355 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 PLA2G6O60733 806 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 DUSP11O75319 330 aaKnown RBP11.62□□□□□ -0.55
CCDC170-202ENST00000537358 CLTBP09497 229 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 TAL1P17542 331 aaPredicted RBP11.62□□□□□ -0.55
CCDC170-202ENST00000537358 MCCP23508 829 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 MFAP1P55081 439 aaKnown RBP11.62□□□□□ -0.55
CCDC170-202ENST00000537358 CTDSPL2Q05D32 466 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 ACVR2BQ13705 512 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 CCDC96Q2M329 555 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 MCMDC2Q4G0Z9 681 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 PCSK9Q8NBP7 692 aaKnown RBP11.62□□□□□ -0.55
CCDC170-202ENST00000537358 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 RWDD1Q9H446 243 aaPredicted RBP11.62□□□□□ -0.55
CCDC170-202ENST00000537358 STARD7Q9NQZ5 370 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.62□□□□□ -0.55
CCDC170-202ENST00000537358 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
CCDC170-202ENST00000537358 MROH7Q68CQ1 1323 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 ASB14A6NK59 587 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 PQBP1O60828 265 aaKnown RBP11.61□□□□□ -0.55
CCDC170-202ENST00000537358 SNAI1O95863 264 aaPredicted RBP11.61□□□□□ -0.55
CCDC170-202ENST00000537358 RAG1P15918 1043 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 TLE2Q04725 743 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 ALX1Q15699 326 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 RRP12Q5JTH9 1297 aaKnown RBP11.61□□□□□ -0.55
CCDC170-202ENST00000537358 RCSD1Q6JBY9 416 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 BADQ92934 168 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 VTI1AQ96AJ9 217 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 GLT1D1Q96MS3 346 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 PDLIM7Q9NR12 457 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 RNF146Q9NTX7 359 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 MTMR7Q9Y216 660 aa11.61□□□□□ -0.55
CCDC170-202ENST00000537358 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC170-202ENST00000537358 SYNRGQ9UMZ2 1314 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 ORC4O43929 436 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 ADAMTS4O75173 837 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 C6orf222P0C671 652 aaPredicted RBP11.6□□□□□ -0.55
CCDC170-202ENST00000537358 ALAS1P13196 640 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 ACLYP53396 1101 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 ZNF697Q5TEC3 545 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 FAM109BQ6ICB4 259 aaPredicted RBP11.6□□□□□ -0.55
CCDC170-202ENST00000537358 KCTD1Q719H9 257 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 NOL8Q76FK4 1167 aaKnown RBP11.6□□□□□ -0.55
CCDC170-202ENST00000537358 Q7L0L9 218 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 RILPL2Q969X0 211 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 CHMP4CQ96CF2 233 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 TMEM39AQ9NV64 488 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 STXBP5LQ9Y2K9 1186 aa11.6□□□□□ -0.55
CCDC170-202ENST00000537358 TOP1P11387 765 aaKnown RBP11.59□□□□□ -0.55
CCDC170-202ENST00000537358 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
CCDC170-202ENST00000537358 KCNA10Q16322 511 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 CCDC174Q6PII3 467 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 CCDC144CPQ8IYA2 1237 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 LENG1Q96BZ8 264 aaPredicted RBP11.59□□□□□ -0.55
CCDC170-202ENST00000537358 AGBL1Q96MI9 1066 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
CCDC170-202ENST00000537358 TOX2Q96NM4 488 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
CCDC170-202ENST00000537358 IL17RBQ9NRM6 502 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 MTMR10Q9NXD2 777 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 PNMA2Q9UL42 364 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 CCPG1Q9ULG6 757 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 ELP1O95163 1332 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 ZMYM6O95789 1325 aa11.59□□□□□ -0.55
CCDC170-202ENST00000537358 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 TRIM43BA6NCK2 446 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 TLR3O15455 904 aaKnown RBP11.58□□□□□ -0.56
CCDC170-202ENST00000537358 ZEB2O60315 1214 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 NMT2O60551 498 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 FGAP02671 866 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 HSPD1P10809 573 aaKnown RBP11.58□□□□□ -0.56
CCDC170-202ENST00000537358 CST5P28325 142 aaPredicted RBP11.58□□□□□ -0.56
CCDC170-202ENST00000537358 TNFAIP2Q03169 654 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 GNASQ5JWF2 1037 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 VPS53Q5VIR6 699 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 MFSD6Q6ZSS7 791 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 ANKRD33Q7Z3H0 272 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 KLHDC9Q8NEP7 349 aa11.58□□□□□ -0.56
CCDC170-202ENST00000537358 TRIM43Q96BQ3 446 aaPredicted RBP11.58□□□□□ -0.56
CCDC170-202ENST00000537358 FAM227BQ96M60 508 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms