RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 F5H6K3 240 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CTNND1O60716 968 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ME1P48163 572 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KLRC3Q07444 240 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PPP2R5BQ15173 497 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SLFN13Q68D06 897 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 HOMER1Q86YM7 354 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 FSIP1Q8NA03 581 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ZC3H15Q8WU90 426 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 GPKOWQ92917 476 aaPredicted RBP eCLIP14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TRIM5Q9C035 493 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ZNF112Q9UJU3 913 aa14.81□□□□□ -0.04
CDK5RAP3-202ENST00000536708 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MYSM1Q5VVJ2 828 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PNMA8AQ86V59 439 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MRFAP1L1Q96HT8 127 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CCDC94Q9BW85 323 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ARHGEF10LQ9HCE6 1279 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 VPS54Q9P1Q0 977 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KCNJ14Q9UNX9 436 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KIF28PB7ZC32 967 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 USP2O75604 605 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 DEXIO95424 95 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PTGS1P23219 599 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SLC1A4P43007 532 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SUPT20HL1Q3ZLR7 823 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ASPRV1Q53RT3 343 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KRT40Q6A162 431 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SCYL3Q8IZE3 742 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 GMCL1P1Q8NEA9 526 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 VAT1LQ9HCJ6 419 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TMX2Q9Y320 296 aa14.8□□□□□ -0.04
CDK5RAP3-202ENST00000536708 GOLGA6L19H0YKK7 550 aa14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PRPF3O43395 683 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KIF23Q02241 960 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 VGLL4Q14135 290 aa14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 C11orf57Q6ZUT1 292 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CCDC186Q7Z3E2 898 aa14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 FEZ1Q99689 392 aa14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 COL11A1P12107 1806 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-202ENST00000536708 AKAP17AQ02040 695 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MTMR2Q13614 643 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 STK38Q15208 465 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PPP4R3BQ5MIZ7 849 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TYW1BQ6NUM6 668 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 C17orf53Q8N3J3 647 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CLMNQ96JQ2 1002 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PIGSQ96S52 555 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SPZ1Q9BXG8 430 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CLIC4Q9Y696 253 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SNCAIPQ9Y6H5 919 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 RLFQ13129 1914 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TRIM75PA6NK02 468 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ADAMTS3O15072 1205 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SPTLC2O15270 562 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SCG2P13521 617 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PTPRAP18433 802 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 FAM83BQ5T0W9 1011 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 DHX40Q8IX18 779 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 DCAF4Q8WV16 495 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ARID3AQ99856 593 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 BPIFA3Q9BQP9 254 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ZNF408Q9H9D4 720 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TRPM7Q96QT4 1865 aa14.78□□□□□ -0.04
CDK5RAP3-202ENST00000536708 LOC285556D6RIA3 1793 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TAL1P17542 331 aaPredicted RBP14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 GNAQP50148 359 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SNAP25P60880 206 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PFKFB3Q16875 520 aaPredicted RBP14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ANO1Q5XXA6 986 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 WWC2Q6AWC2 1192 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ADGRF4Q8IZF3 695 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ZNF710Q8N1W2 664 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 GMCL1Q96IK5 515 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 VCPKMTQ9H867 229 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PICK1Q9NRD5 415 aa14.77□□□□□ -0.04
CDK5RAP3-202ENST00000536708 USP17L10C9JJH3 530 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 NEMFO60524 1076 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 CMA1P23946 247 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 SF3A1Q15459 793 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 AXDND1Q5T1B0 1012 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 HEATR3Q7Z4Q2 680 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 OXER1Q8TDS5 423 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 NAT10Q9H0A0 1025 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 GOPCQ9HD26 462 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 KIAA1468Q9P260 1216 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 PPP1R11O60927 126 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 BMP3P12645 472 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 NDUFA8P51970 172 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 SPP2Q13103 211 aa14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 IKQ13123 557 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-202ENST00000536708 TTLL12Q14166 644 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms