RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ARHGEF6Q15052 776 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 CTU1Q7Z7A3 348 aaKnown RBP14.04□□□□□ -0.16
CHD4-203ENST00000535717 CCAR1Q8IX12 1150 aaKnown RBP14.04□□□□□ -0.16
CHD4-203ENST00000535717 SHCBP1Q8NEM2 672 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 AGBL1Q96MI9 1066 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 TBC1D32Q96NH3 1257 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 LARP6Q9BRS8 491 aaKnown RBP14.04□□□□□ -0.16
CHD4-203ENST00000535717 MROH8Q9H579 483 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
CHD4-203ENST00000535717 HPS5Q9UPZ3 1129 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 TRIM17Q9Y577 477 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 CYTH3O43739 400 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 DHX16O60231 1041 aaKnown RBP14.03□□□□□ -0.16
CHD4-203ENST00000535717 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 SLC25A27O95847 323 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 GNRH1P01148 92 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 ICAM1P05362 532 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 TAL1P17542 331 aaPredicted RBP14.03□□□□□ -0.16
CHD4-203ENST00000535717 PDIA3P30101 505 aaKnown RBP14.03□□□□□ -0.16
CHD4-203ENST00000535717 SLC4A3P48751 1232 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 RCAN1P53805 252 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 AK2P54819 239 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 RTN1Q16799 776 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 WDR78Q5VTH9 848 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 GPR142Q7Z601 462 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 PLEKHH3Q7Z736 793 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 NCAPG2Q86XI2 1143 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 CMTR1Q8N1G2 835 aaKnown RBP14.03□□□□□ -0.16
CHD4-203ENST00000535717 SRBD1Q8N5C6 995 aaKnown RBP14.03□□□□□ -0.16
CHD4-203ENST00000535717 COA7Q96BR5 231 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 MTMR8Q96EF0 704 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 RIOX1Q9H6W3 641 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 FAM217BQ9NTX9 383 aaPredicted RBP14.03□□□□□ -0.16
CHD4-203ENST00000535717 DOCK3Q8IZD9 2030 aa14.03□□□□□ -0.16
CHD4-203ENST00000535717 BAZ2BQ9UIF8 2168 aaKnown RBP14.02□□□□□ -0.16
CHD4-203ENST00000535717 GOLGA8AA7E2F4 631 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 COPB2P35606 906 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 GNAQP50148 359 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 PRKCZQ05513 592 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 CDC37Q16543 378 aaPredicted RBP14.02□□□□□ -0.17
CHD4-203ENST00000535717 COL13A1Q5TAT6 717 aaPredicted RBP14.02□□□□□ -0.17
CHD4-203ENST00000535717 TMTC3Q6ZXV5 915 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 LZTS2Q9BRK4 669 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 CWC22Q9HCG8 908 aaKnown RBP14.02□□□□□ -0.17
CHD4-203ENST00000535717 TSHZ2Q9NRE2 1034 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 SRRDQ9UH36 339 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 GJD2Q9UKL4 321 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 GABRQQ9UN88 632 aa14.02□□□□□ -0.17
CHD4-203ENST00000535717 NID2Q14112 1375 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 ALAS1P13196 640 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 PTPREP23469 700 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 HOXD10P28358 340 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 SMARCA1P28370 1054 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 CDC27P30260 824 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 ADD1P35611 737 aaKnown RBP14.01□□□□□ -0.17
CHD4-203ENST00000535717 METAP2P50579 478 aaKnown RBP eCLIP14.01□□□□□ -0.178e-8■■□□□ 12.3
CHD4-203ENST00000535717 QRICH1Q2TAL8 776 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 MORN1Q5T089 497 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 ZNF274Q96GC6 653 aaPredicted RBP14.01□□□□□ -0.17
CHD4-203ENST00000535717 PIGSQ96S52 555 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 HOMER2Q9NSB8 354 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 RBM28Q9NW13 759 aaKnown RBP14.01□□□□□ -0.17
CHD4-203ENST00000535717 TPCN1Q9ULQ1 816 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 PTPN22Q9Y2R2 807 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 SMCHD1A6NHR9 2005 aa14.01□□□□□ -0.17
CHD4-203ENST00000535717 PLXNB2O15031 1838 aa14□□□□□ -0.17
CHD4-203ENST00000535717 SLC15A5A6NIM6 579 aa14□□□□□ -0.17
CHD4-203ENST00000535717 ZBTB5O15062 677 aa14□□□□□ -0.17
CHD4-203ENST00000535717 STRNO43815 780 aa14□□□□□ -0.17
CHD4-203ENST00000535717 PPP1R11O60927 126 aaPredicted RBP14□□□□□ -0.17
CHD4-203ENST00000535717 FLT3LGP49771 235 aa14□□□□□ -0.17
CHD4-203ENST00000535717 PRMT2P55345 433 aa14□□□□□ -0.17
CHD4-203ENST00000535717 FUT2Q10981 343 aa14□□□□□ -0.17
CHD4-203ENST00000535717 GRB14Q14449 540 aa14□□□□□ -0.17
CHD4-203ENST00000535717 PPP2R5BQ15173 497 aa14□□□□□ -0.17
CHD4-203ENST00000535717 ANKRD1Q15327 319 aa14□□□□□ -0.17
CHD4-203ENST00000535717 TKFCQ3LXA3 575 aa14□□□□□ -0.17
CHD4-203ENST00000535717 MUM1L1Q5H9M0 696 aa14□□□□□ -0.17
CHD4-203ENST00000535717 HOMER1Q86YM7 354 aa14□□□□□ -0.17
CHD4-203ENST00000535717 CCDC82Q8N4S0 544 aa14□□□□□ -0.17
CHD4-203ENST00000535717 CHST13Q8NET6 341 aa14□□□□□ -0.17
CHD4-203ENST00000535717 PIBF1Q8WXW3 757 aa14□□□□□ -0.17
CHD4-203ENST00000535717 USP6NLQ92738 828 aa14□□□□□ -0.17
CHD4-203ENST00000535717 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
CHD4-203ENST00000535717 NCOA5Q9HCD5 579 aaKnown RBP14□□□□□ -0.17
CHD4-203ENST00000535717 RNF146Q9NTX7 359 aa14□□□□□ -0.17
CHD4-203ENST00000535717 IVNS1ABPQ9Y6Y0 642 aa14□□□□□ -0.17
CHD4-203ENST00000535717 PNMA6FA0A0J9YX94 578 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 CCDC196A0A1B0GTZ2 297 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 FCER1AP12319 257 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 ADORA2AP29274 412 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 CCT2P78371 535 aaKnown RBP13.99□□□□□ -0.17
CHD4-203ENST00000535717 STK3Q13188 491 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 RABEP1Q15276 862 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
CHD4-203ENST00000535717 USH1GQ495M9 461 aa13.99□□□□□ -0.17
CHD4-203ENST00000535717 NOL8Q76FK4 1167 aaKnown RBP13.99□□□□□ -0.17
CHD4-203ENST00000535717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 282.1 ms