RNA–Protein interactions for RNA: ENST00000535283.5

DDB1-206, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-206ENST00000535283 GMCL1Q96IK5 515 aa11.28□□□□□ -0.6
DDB1-206ENST00000535283 SPATA32Q96LK8 384 aa11.28□□□□□ -0.6
DDB1-206ENST00000535283 DNAJC18Q9H819 358 aa11.28□□□□□ -0.6
DDB1-206ENST00000535283 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
DDB1-206ENST00000535283 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
DDB1-206ENST00000535283 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
DDB1-206ENST00000535283 ELP1O95163 1332 aa11.28□□□□□ -0.6
DDB1-206ENST00000535283 OTOFQ9HC10 1997 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.61
DDB1-206ENST00000535283 TRAK2O60296 914 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 PRPF40AO75400 957 aaKnown RBP11.27□□□□□ -0.61
DDB1-206ENST00000535283 GDF11O95390 407 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 PLEKHA8P1O95397 391 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 USP14P54578 494 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 UBE2HP62256 183 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 ZNF543Q08ER8 600 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 IKQ13123 557 aaPredicted RBP11.27□□□□□ -0.61
DDB1-206ENST00000535283 RESTQ13127 1097 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 SEPT2Q15019 361 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 MCTP2Q6DN12 878 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.61
DDB1-206ENST00000535283 SRBD1Q8N5C6 995 aaKnown RBP11.27□□□□□ -0.61
DDB1-206ENST00000535283 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 CHURC1Q8WUH1 139 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 FEZ1Q99689 392 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDB1-206ENST00000535283 PICK1Q9NRD5 415 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 CNTNAP5Q8WYK1 1306 aa11.27□□□□□ -0.61
DDB1-206ENST00000535283 DDX60LQ5H9U9 1706 aaKnown RBP11.26□□□□□ -0.61
DDB1-206ENST00000535283 FIBPO43427 364 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 BMP3P12645 472 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 U2AF2P26368 475 aaKnown RBP eCLIP11.26□□□□□ -0.615e-14■■■■■ 54.8
DDB1-206ENST00000535283 FOSBP53539 338 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 DNM1Q05193 864 aaKnown RBP11.26□□□□□ -0.61
DDB1-206ENST00000535283 MTFR1Q15390 333 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
DDB1-206ENST00000535283 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
DDB1-206ENST00000535283 MIGA2Q7L4E1 593 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 NOSTRINQ8IVI9 506 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 DIS3L2Q8IYB7 885 aaKnown RBP11.26□□□□□ -0.61
DDB1-206ENST00000535283 LPAR1Q92633 364 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 RIOX1Q9H6W3 641 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 TMX2Q9Y320 296 aa11.26□□□□□ -0.61
DDB1-206ENST00000535283 PNMA6FA0A0J9YX94 578 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 FAM196BA6NMK8 535 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 USP17L5A8MUK1 530 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 F5H6K3 240 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 YEATS4O95619 227 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 ZBTB48P10074 688 aaPredicted RBP11.25□□□□□ -0.61
DDB1-206ENST00000535283 TRAPPC10P48553 1259 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 KLRC3Q07444 240 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 FUT2Q10981 343 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 STK38Q15208 465 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 FAM160B2Q86V87 743 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
DDB1-206ENST00000535283 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
DDB1-206ENST00000535283 PHF20Q9BVI0 1012 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 ARHGAP39Q9C0H5 1083 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 BARHL2Q9NY43 387 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 MUC3AQ02505 3323 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
DDB1-206ENST00000535283 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
DDB1-206ENST00000535283 ZBTB5O15062 677 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 PLA2G6O60733 806 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 ECM2O94769 699 aaPredicted RBP11.24□□□□□ -0.61
DDB1-206ENST00000535283 LETM1O95202 739 aaPredicted RBP11.24□□□□□ -0.61
DDB1-206ENST00000535283 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 FDX1P10109 184 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
DDB1-206ENST00000535283 NAPAP54920 295 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 UBE2Q1Q7Z7E8 422 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 SCYL3Q8IZE3 742 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 STAG2Q8N3U4 1231 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 DEFB123Q8N688 67 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 CCDC34Q96HJ3 373 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 TEPSINQ96N21 525 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 VCPKMTQ9H867 229 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 LMBRD1Q9NUN5 540 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 VPS54Q9P1Q0 977 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 CNPY2Q9Y2B0 182 aa11.24□□□□□ -0.61
DDB1-206ENST00000535283 CTDP1Q9Y5B0 961 aaPredicted RBP11.24□□□□□ -0.61
DDB1-206ENST00000535283 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
DDB1-206ENST00000535283 MYH1P12882 1939 aa11.23□□□□□ -0.61
DDB1-206ENST00000535283 LAMA2P24043 3122 aaKnown RBP11.23□□□□□ -0.61
DDB1-206ENST00000535283 CCDC194A0A1B0GVG4 234 aa11.23□□□□□ -0.61
DDB1-206ENST00000535283 ESYT2A0FGR8 921 aa11.23□□□□□ -0.61
DDB1-206ENST00000535283 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms