RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 CPVLQ9H3G5 476 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 FBXO28Q9NVF7 368 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 CCDC39Q9UFE4 941 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 PPP1R9AQ9ULJ8 1098 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 ADAMTS5Q9UNA0 930 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 SMC3Q9UQE7 1217 aa14.19□□□□□ -0.14
SCARB1-204ENST00000535005 DSG3P32926 999 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 MKRN3Q13064 507 aaKnown RBP14.18□□□□□ -0.14
SCARB1-204ENST00000535005 ZSCAN23Q3MJ62 389 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 SLC26A6Q9BXS9 759 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 ZCCHC17Q9NP64 241 aaKnown RBP14.18□□□□□ -0.14
SCARB1-204ENST00000535005 HOXC10Q9NYD6 342 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 ORC3Q9UBD5 711 aaPredicted RBP14.18□□□□□ -0.14
SCARB1-204ENST00000535005 V9GY48 417 aaPredicted RBP14.18□□□□□ -0.14
SCARB1-204ENST00000535005 FLOT1O75955 427 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 DEXIO95424 95 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 MBD3O95983 291 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 IKQ13123 557 aaPredicted RBP14.18□□□□□ -0.14
SCARB1-204ENST00000535005 LBX2Q6XYB7 198 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
SCARB1-204ENST00000535005 LMBRD1Q9NUN5 540 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 ZKSCAN5Q9Y2L8 839 aa14.18□□□□□ -0.14
SCARB1-204ENST00000535005 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 BTBD19C9JJ37 291 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 ZBTB5O15062 677 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 OSBPP22059 807 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
SCARB1-204ENST00000535005 NOGQ13253 232 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 PKN1Q16512 942 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 CYP4F22Q6NT55 531 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 WASF1Q92558 559 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 KIFC2Q96AC6 838 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 PIGSQ96S52 555 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 PTPN18Q99952 460 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
SCARB1-204ENST00000535005 VAT1LQ9HCJ6 419 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
SCARB1-204ENST00000535005 GJB2P29033 226 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 TM4SF4P48230 202 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 PFKFB3Q16875 520 aaPredicted RBP14.16□□□□□ -0.14
SCARB1-204ENST00000535005 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
SCARB1-204ENST00000535005 RGS22Q8NE09 1264 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 DDX11Q96FC9 970 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 CAPNS2Q96L46 248 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 ASCC2Q9H1I8 757 aaPredicted RBP14.16□□□□□ -0.14
SCARB1-204ENST00000535005 SLC38A10Q9HBR0 1119 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 PNMA3Q9UL41 463 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 RLFQ13129 1914 aa14.16□□□□□ -0.14
SCARB1-204ENST00000535005 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 IRX3P78415 501 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 SREBF2Q12772 1141 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 CDC37Q16543 378 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 FAM177A1Q8N128 213 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 P2RX7Q99572 595 aaKnown RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 PNMA2Q9UL42 364 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 BAZ2BQ9UIF8 2168 aaKnown RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 hCG_1984214I3L0E3 225 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 PDHXO00330 501 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 VWA5AO00534 786 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 DTNBO60941 627 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 ZBED4O75132 1171 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 PPFIA3O75145 1194 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 SCG2P13521 617 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 KIF23Q02241 960 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 TRAF1Q13077 416 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 QRICH1Q2TAL8 776 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 ZNF713Q8N859 430 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-204ENST00000535005 FAM184AQ8NB25 1140 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 REPS2Q8NFH8 660 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 ATG4CQ96DT6 458 aa14.15□□□□□ -0.14
SCARB1-204ENST00000535005 hCG_1642624A0A1W2PR95 340 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 ATP2A1O14983 1001 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 OAZ1P54368 228 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 C1QTNF8P60827 252 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 HERVK_113P62684 666 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 SASS6Q6UVJ0 657 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
SCARB1-204ENST00000535005 HOMER1Q86YM7 354 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 SMAP1Q8IYB5 467 aaPredicted RBP14.14□□□□□ -0.15
SCARB1-204ENST00000535005 MB21D1Q8N884 522 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 GTF3C2Q8WUA4 911 aaPredicted RBP14.14□□□□□ -0.15
SCARB1-204ENST00000535005 ALG1Q9BT22 464 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 SH3GLB2Q9NR46 395 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 PARP14Q460N5 1801 aa14.14□□□□□ -0.15
SCARB1-204ENST00000535005 IGF2BP3O00425 579 aaKnown RBP eCLIP14.13□□□□□ -0.153e-8■■■■□ 21.1
SCARB1-204ENST00000535005 PPP1R11O60927 126 aaPredicted RBP14.13□□□□□ -0.15
SCARB1-204ENST00000535005 PDIA4P13667 645 aaKnown RBP14.13□□□□□ -0.15
SCARB1-204ENST00000535005 PDCP20941 246 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 MAP2K2P36507 400 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 OTUD7BQ6GQQ9 843 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 POTEEQ6S8J3 1075 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 FBXO11Q86XK2 927 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 PIBF1Q8WXW3 757 aa14.13□□□□□ -0.15
SCARB1-204ENST00000535005 AMNQ9BXJ7 453 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms