RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 STRIP1Q5VSL9 837 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 PNMA8AQ86V59 439 aaPredicted RBP9.36□□□□□ -0.91
CASP4-212ENST00000533730 TXNRD3Q86VQ6 643 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 VPS37DQ86XT2 251 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 ERC1Q8IUD2 1116 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 AGBL3Q8NEM8 1001 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 DPF2Q92785 391 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 OSBPL7Q9BZF2 842 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 RRAGCQ9HB90 399 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 CD209Q9NNX6 404 aa9.36□□□□□ -0.91
CASP4-212ENST00000533730 NOP58Q9Y2X3 529 aaKnown RBP9.36□□□□□ -0.91
CASP4-212ENST00000533730 SNAP23O00161 211 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 STK10O94804 968 aaKnown RBP9.35□□□□□ -0.91
CASP4-212ENST00000533730 IL1R1P14778 569 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 KLRK1P26718 216 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 IRS1P35568 1242 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 GMPSP49915 693 aaPredicted RBP9.35□□□□□ -0.91
CASP4-212ENST00000533730 SV2AQ7L0J3 742 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 IRF7Q92985 503 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
CASP4-212ENST00000533730 OSBPL2Q9H1P3 480 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 GPR108Q9NPR9 543 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 GNL3LQ9NVN8 582 aaKnown RBP9.35□□□□□ -0.91
CASP4-212ENST00000533730 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
CASP4-212ENST00000533730 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.35□□□□□ -0.91
CASP4-212ENST00000533730 GPC6Q9Y625 555 aaPredicted RBP9.35□□□□□ -0.91
CASP4-212ENST00000533730 A0A1W2PNR3 127 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 H7C1D1 291 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 TOMM70O94826 608 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 SASH1O94885 1247 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 EPHX2P34913 555 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 FKBP1AP62942 108 aaKnown RBP9.34□□□□□ -0.91
CASP4-212ENST00000533730 TFCP2Q12800 502 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 TTLL5Q6EMB2 1281 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 NLRP8Q86W28 1048 aa9.34□□□□□ -0.91
CASP4-212ENST00000533730 TDRD7Q8NHU6 1098 aaKnown RBP9.34□□□□□ -0.91
CASP4-212ENST00000533730 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
CASP4-212ENST00000533730 FAM84BQ96KN1 310 aaPredicted RBP9.34□□□□□ -0.91
CASP4-212ENST00000533730 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
CASP4-212ENST00000533730 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
CASP4-212ENST00000533730 FOXD3Q9UJU5 478 aaPredicted RBP9.34□□□□□ -0.91
CASP4-212ENST00000533730 SUPT16HQ9Y5B9 1047 aaKnown RBP9.34□□□□□ -0.91
CASP4-212ENST00000533730 FAM205AQ6ZU69 1335 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 PSME4Q14997 1843 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 A0A1B0GUL7 405 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 CDC14CA4D256 554 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 FRAT2O75474 233 aaPredicted RBP9.33□□□□□ -0.92
CASP4-212ENST00000533730 GYG1P46976 350 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 GJA8P48165 433 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 ARSJQ5FYB0 599 aaPredicted RBP9.33□□□□□ -0.92
CASP4-212ENST00000533730 DACT2Q5SW24 774 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 USP50Q70EL3 339 aaPredicted RBP9.33□□□□□ -0.92
CASP4-212ENST00000533730 PGBD3Q8N328 593 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 TBC1D22AQ8WUA7 517 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 CCDC74AQ96AQ1 378 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 KIF1BPQ96EK5 621 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 CRBNQ96SW2 442 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 KCNQ5Q9NR82 932 aa9.33□□□□□ -0.92
CASP4-212ENST00000533730 ADARB2Q9NS39 739 aaKnown RBP9.33□□□□□ -0.92
CASP4-212ENST00000533730 CNOT7Q9UIV1 285 aaKnown RBP9.33□□□□□ -0.92
CASP4-212ENST00000533730 SCN9AQ15858 1988 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 RPLP1P05386 114 aaKnown RBP9.32□□□□□ -0.92
CASP4-212ENST00000533730 FSTL1Q12841 308 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 PAK2Q13177 524 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 BMS1Q14692 1282 aaKnown RBP9.32□□□□□ -0.92
CASP4-212ENST00000533730 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
CASP4-212ENST00000533730 EFHC2Q5JST6 749 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 GORABQ5T7V8 394 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 EGFLAMQ63HQ2 1017 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 LDHDQ86WU2 507 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 SIRT2Q8IXJ6 389 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 SMC1BQ8NDV3 1235 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 NDFIP2Q9NV92 336 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 FAM13BQ9NYF5 915 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 HDAC9Q9UKV0 1011 aa9.32□□□□□ -0.92
CASP4-212ENST00000533730 UTRNP46939 3433 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 ARAP2Q8WZ64 1704 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 TNFRSF21O75509 655 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 MICAL2O94851 1124 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 USP17L7P0C7H9 530 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 ATF4P18848 351 aaPredicted RBP9.31□□□□□ -0.92
CASP4-212ENST00000533730 EPS15P42566 896 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 ZNF280AP59817 542 aaPredicted RBP9.31□□□□□ -0.92
CASP4-212ENST00000533730 TIMM10P62072 90 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 TNNI3KQ59H18 835 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 WDR66Q8TBY9 1149 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 RHPN1Q8TCX5 695 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 GTPBP3Q969Y2 492 aaKnown RBP9.31□□□□□ -0.92
CASP4-212ENST00000533730 NEUROD6Q96NK8 337 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 ZCCHC2Q9C0B9 1178 aaKnown RBP9.31□□□□□ -0.92
CASP4-212ENST00000533730 DENND2AQ9ULE3 1009 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 EXOC6BQ9Y2D4 811 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 FPGT-TNNI3KV9GXZ4 949 aa9.31□□□□□ -0.92
CASP4-212ENST00000533730 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
CASP4-212ENST00000533730 GIPC1O14908 333 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 UQCRFS1P1P0C7P4 283 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 CCDC158Q5M9N0 1113 aa9.3□□□□□ -0.92
CASP4-212ENST00000533730 MFSD14BQ5SR56 506 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms