RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 ERO1AQ96HE7 468 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 PAGR1Q9BTK6 254 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 CPA4Q9UI42 421 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 RLFQ13129 1914 aa25.31■■□□□ 1.64
VPS51-212ENST00000533656 PARP14Q460N5 1801 aa25.3■■□□□ 1.64
VPS51-212ENST00000533656 PFKFB2O60825 505 aa25.3■■□□□ 1.64
VPS51-212ENST00000533656 SP3Q02447 781 aa25.3■■□□□ 1.64
VPS51-212ENST00000533656 CPLX2Q6PUV4 134 aaKnown RBP25.3■■□□□ 1.64
VPS51-212ENST00000533656 MTMR8Q96EF0 704 aa25.3■■□□□ 1.64
VPS51-212ENST00000533656 SLKQ9H2G2 1235 aaPredicted RBP25.3■■□□□ 1.64
VPS51-212ENST00000533656 SH2B1Q9NRF2 756 aaPredicted RBP25.3■■□□□ 1.64
VPS51-212ENST00000533656 CNMDO75829 334 aa25.29■■□□□ 1.64
VPS51-212ENST00000533656 TRAF1Q13077 416 aa25.29■■□□□ 1.64
VPS51-212ENST00000533656 TMEM132BQ14DG7 1078 aa25.29■■□□□ 1.64
VPS51-212ENST00000533656 TEX13BQ9BXU2 312 aa25.29■■□□□ 1.64
VPS51-212ENST00000533656 SPATC1LQ9H0A9 340 aa25.29■■□□□ 1.64
VPS51-212ENST00000533656 JMJD4Q9H9V9 463 aa25.29■■□□□ 1.64
VPS51-212ENST00000533656 FAM217BQ9NTX9 383 aaPredicted RBP25.29■■□□□ 1.64
VPS51-212ENST00000533656 BTBD7Q9P203 1132 aa25.29■■□□□ 1.64
VPS51-212ENST00000533656 ZNF214Q9UL59 606 aaPredicted RBP25.29■■□□□ 1.64
VPS51-212ENST00000533656 PLEKHA8P1O95397 391 aa25.28■■□□□ 1.64
VPS51-212ENST00000533656 SLC25A27O95847 323 aa25.28■■□□□ 1.64
VPS51-212ENST00000533656 CDC27P30260 824 aa25.28■■□□□ 1.64
VPS51-212ENST00000533656 POTEEQ6S8J3 1075 aa25.28■■□□□ 1.64
VPS51-212ENST00000533656 SRBD1Q8N5C6 995 aaKnown RBP25.28■■□□□ 1.64
VPS51-212ENST00000533656 LARP6Q9BRS8 491 aaKnown RBP25.28■■□□□ 1.64
VPS51-212ENST00000533656 TXNRD2Q9NNW7 524 aa25.28■■□□□ 1.64
VPS51-212ENST00000533656 RBM27Q9P2N5 1060 aaKnown RBP25.28■■□□□ 1.64
VPS51-212ENST00000533656 PTPN22Q9Y2R2 807 aa25.28■■□□□ 1.64
VPS51-212ENST00000533656 CPLX1O14810 134 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 CDKL5O76039 1030 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 ICAM1P05362 532 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 ADD1P35611 737 aaKnown RBP25.27■■□□□ 1.64
VPS51-212ENST00000533656 STAT3P40763 770 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 CDC37Q16543 378 aaPredicted RBP25.27■■□□□ 1.64
VPS51-212ENST00000533656 TKFCQ3LXA3 575 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 RIOX2Q8IUF8 465 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 SHCBP1Q8NEM2 672 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 RRP36Q96EU6 259 aaKnown RBP25.27■■□□□ 1.64
VPS51-212ENST00000533656 CPVLQ9H3G5 476 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 EFCC1Q9HA90 598 aa25.27■■□□□ 1.64
VPS51-212ENST00000533656 KIAA0100Q14667 2235 aaKnown RBP25.27■■□□□ 1.64
VPS51-212ENST00000533656 ZBTB5O15062 677 aa25.26■■□□□ 1.63
VPS51-212ENST00000533656 CYTH3O43739 400 aa25.26■■□□□ 1.63
VPS51-212ENST00000533656 CCT2P78371 535 aaKnown RBP25.26■■□□□ 1.63
VPS51-212ENST00000533656 STK3Q13188 491 aa25.26■■□□□ 1.63
VPS51-212ENST00000533656 ME3Q16798 604 aa25.26■■□□□ 1.63
VPS51-212ENST00000533656 NOL8Q76FK4 1167 aaKnown RBP25.26■■□□□ 1.63
VPS51-212ENST00000533656 NBPF11Q86T75 865 aa25.26■■□□□ 1.63
VPS51-212ENST00000533656 GTF3C6Q969F1 213 aa25.26■■□□□ 1.63
VPS51-212ENST00000533656 VAT1LQ9HCJ6 419 aa25.26■■□□□ 1.63
VPS51-212ENST00000533656 SEC63Q9UGP8 760 aaKnown RBP25.26■■□□□ 1.63
VPS51-212ENST00000533656 IFNAR1P17181 557 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 MAPK4P31152 587 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 SCRN1Q12765 414 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 PLS1Q14651 629 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 KIF22Q14807 665 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 ARHGEF6Q15052 776 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 SLC35G1Q2M3R5 365 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 SNRNP48Q6IEG0 339 aaKnown RBP25.25■■□□□ 1.63
VPS51-212ENST00000533656 CCAR1Q8IX12 1150 aaKnown RBP25.25■■□□□ 1.63
VPS51-212ENST00000533656 RAVER2Q9HCJ3 691 aaKnown RBP25.25■■□□□ 1.63
VPS51-212ENST00000533656 ZNF536O15090 1300 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 CNTNAP5Q8WYK1 1306 aa25.25■■□□□ 1.63
VPS51-212ENST00000533656 PNMA6FA0A0J9YX94 578 aa25.24■■□□□ 1.63
VPS51-212ENST00000533656 FUT2Q10981 343 aa25.24■■□□□ 1.63
VPS51-212ENST00000533656 QRICH1Q2TAL8 776 aa25.24■■□□□ 1.63
VPS51-212ENST00000533656 CCDC174Q6PII3 467 aa25.24■■□□□ 1.63
VPS51-212ENST00000533656 CPXCR1Q8N123 301 aa25.24■■□□□ 1.63
VPS51-212ENST00000533656 MOV10L1Q9BXT6 1211 aaKnown RBP25.24■■□□□ 1.63
VPS51-212ENST00000533656 MROH8Q9H579 483 aa25.24■■□□□ 1.63
VPS51-212ENST00000533656 NCOA5Q9HCD5 579 aaKnown RBP25.24■■□□□ 1.63
VPS51-212ENST00000533656 CCPG1Q9ULG6 757 aa25.24■■□□□ 1.63
VPS51-212ENST00000533656 LACTBP83111 547 aaPredicted RBP25.23■■□□□ 1.63
VPS51-212ENST00000533656 NTRK3Q16288 839 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 Q3C1V9 767 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 FBXO11Q86XK2 927 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 HOMER1Q86YM7 354 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 PIGSQ96S52 555 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 AMNQ9BXJ7 453 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 RNF26Q9BY78 433 aaPredicted RBP25.23■■□□□ 1.63
VPS51-212ENST00000533656 ARHGAP39Q9C0H5 1083 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 FBXO40Q9UH90 709 aa25.23■■□□□ 1.63
VPS51-212ENST00000533656 POTEFA5A3E0 1075 aa25.22■■□□□ 1.63
VPS51-212ENST00000533656 hCG_1984214I3L0E3 225 aa25.22■■□□□ 1.63
VPS51-212ENST00000533656 LARGE1O95461 756 aa25.22■■□□□ 1.63
VPS51-212ENST00000533656 AKAP17AQ02040 695 aaKnown RBP25.22■■□□□ 1.63
VPS51-212ENST00000533656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.22■■□□□ 1.63
VPS51-212ENST00000533656 TRIM22Q8IYM9 498 aa25.22■■□□□ 1.63
VPS51-212ENST00000533656 CMTR1Q8N1G2 835 aaKnown RBP25.22■■□□□ 1.63
VPS51-212ENST00000533656 ZNF713Q8N859 430 aaPredicted RBP25.22■■□□□ 1.63
VPS51-212ENST00000533656 CHST13Q8NET6 341 aa25.22■■□□□ 1.63
VPS51-212ENST00000533656 SNX21Q969T3 373 aa25.22■■□□□ 1.63
VPS51-212ENST00000533656 MAF1Q9H063 256 aa25.22■■□□□ 1.63
VPS51-212ENST00000533656 ABCB11O95342 1321 aa25.21■■□□□ 1.63
VPS51-212ENST00000533656 FCGRTP55899 365 aa25.21■■□□□ 1.63
VPS51-212ENST00000533656 SNAP25P60880 206 aa25.21■■□□□ 1.63
VPS51-212ENST00000533656 CCDC82Q8N4S0 544 aa25.21■■□□□ 1.63
VPS51-212ENST00000533656 AGBL1Q96MI9 1066 aa25.21■■□□□ 1.63
VPS51-212ENST00000533656 CWC22Q9HCG8 908 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms