RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 VAV2P52735 878 aa13.81□□□□□ -0.2
RAD50-209ENST00000533482 LRRC41Q15345 812 aa13.81□□□□□ -0.2
RAD50-209ENST00000533482 TBCKQ8TEA7 893 aa13.81□□□□□ -0.2
RAD50-209ENST00000533482 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
RAD50-209ENST00000533482 NCOA3Q9Y6Q9 1424 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 SPATA31D1Q6ZQQ2 1576 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 CTDNEP1O95476 244 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 SELENOOQ9BVL4 669 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 PPLO60437 1756 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 B4DLN1 442 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 SEC31AO94979 1220 aaKnown RBP13.8□□□□□ -0.2
RAD50-209ENST00000533482 CAMTA2O94983 1202 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 PTPREP23469 700 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 UBE2SQ16763 222 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 LINC00116Q8NCU8 138 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 IFIH1Q9BYX4 1025 aaKnown RBP13.8□□□□□ -0.2
RAD50-209ENST00000533482 MEGF6O75095 1541 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 SHC4Q6S5L8 630 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 ACRBPQ8NEB7 543 aa13.8□□□□□ -0.2
RAD50-209ENST00000533482 MRPL44Q9H9J2 332 aaKnown RBP13.8□□□□□ -0.2
RAD50-209ENST00000533482 EPN1Q9Y6I3 576 aaPredicted RBP13.8□□□□□ -0.2
RAD50-209ENST00000533482 H7C1D1 291 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 FDPSP14324 419 aaKnown RBP13.79□□□□□ -0.2
RAD50-209ENST00000533482 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
RAD50-209ENST00000533482 OAS2P29728 719 aaKnown RBP13.79□□□□□ -0.2
RAD50-209ENST00000533482 TRIM31Q9BZY9 425 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 GDAQ9Y2T3 454 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 PXDNQ92626 1479 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 TESPA1A2RU30 521 aaPredicted RBP13.79□□□□□ -0.2
RAD50-209ENST00000533482 FAM205CA6NFA0 338 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 CTNNA2P26232 953 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 ERCC5P28715 1186 aaPredicted RBP13.79□□□□□ -0.2
RAD50-209ENST00000533482 GPBP1Q86WP2 473 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 ZNF34Q8IZ26 560 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 SLC35F6Q8N357 371 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 SUPT20HQ8NEM7 779 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 PAGE5Q96GU1 130 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 KCNF1Q9H3M0 494 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 SLC9C1Q4G0N8 1177 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 VSTM4Q8IW00 320 aa13.79□□□□□ -0.2
RAD50-209ENST00000533482 DDX25Q9UHL0 483 aaKnown RBP13.79□□□□□ -0.2
RAD50-209ENST00000533482 PRPF3O43395 683 aaKnown RBP13.78□□□□□ -0.2
RAD50-209ENST00000533482 GAS7O60861 476 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 ANTXR2P58335 489 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 KLHL30Q0D2K2 578 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 ENOX1Q8TC92 643 aaKnown RBP13.78□□□□□ -0.2
RAD50-209ENST00000533482 TUBGCP2Q9BSJ2 902 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 NUP58Q9BVL2 599 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 CSF1RP07333 972 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 CCDC172P0C7W6 258 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 NF2P35240 595 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 RESP18Q5W5W9 173 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 PLA2G4DQ86XP0 818 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 KLHL7Q8IXQ5 586 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 STAG1Q8WVM7 1258 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 LONP1P36776 959 aaKnown RBP13.78□□□□□ -0.2
RAD50-209ENST00000533482 PPP1R2P41236 205 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 DNM2P50570 870 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 BIRC3Q13489 604 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 TXNRD1Q16881 649 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 CCDC84Q86UT8 332 aaPredicted RBP13.78□□□□□ -0.2
RAD50-209ENST00000533482 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 SPTLC3Q9NUV7 552 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 PCDHA4Q9UN74 947 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 SPATA31A1Q5TZJ5 1347 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 GOLGA6L10A0A0M3HER8 536 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 BUB1O43683 1085 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 EPB41P11171 864 aaKnown RBP13.78□□□□□ -0.2
RAD50-209ENST00000533482 SMC1AQ14683 1233 aaKnown RBP13.78□□□□□ -0.2
RAD50-209ENST00000533482 C8orf74Q6P047 294 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 CLEC10AQ8IUN9 316 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
RAD50-209ENST00000533482 KIAA1024Q9UPX6 916 aa13.78□□□□□ -0.2
RAD50-209ENST00000533482 TTLL1O95922 423 aa13.77□□□□□ -0.2
RAD50-209ENST00000533482 PABPC4Q13310 644 aaKnown RBP eCLIP13.77□□□□□ -0.2
RAD50-209ENST00000533482 FRMD4BQ9Y2L6 1034 aa13.77□□□□□ -0.2
RAD50-209ENST00000533482 DEPDC5O75140 1603 aa13.77□□□□□ -0.2
RAD50-209ENST00000533482 ZMYND10O75800 440 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 CFAP58Q5T655 872 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 USP49Q70CQ1 688 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
RAD50-209ENST00000533482 FLOT1O75955 427 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 PCP11498 1178 aaKnown RBP13.77□□□□□ -0.21
RAD50-209ENST00000533482 KLRK1P26718 216 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 GPSM2P81274 684 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 MAP2K1Q02750 393 aaPredicted RBP13.77□□□□□ -0.21
RAD50-209ENST00000533482 SARM1Q6SZW1 724 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 SND1Q7KZF4 910 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAD50-209ENST00000533482 CCDC25Q86WR0 208 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 MYOCDQ8IZQ8 938 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 DPF2Q92785 391 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 TMEM47Q9BQJ4 181 aa13.77□□□□□ -0.21
RAD50-209ENST00000533482 MEIS1O00470 390 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 CEP104O60308 925 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 EXOC3O60645 756 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms