RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PRR12Q9ULL5 1215 aa27.64■■■□□ 2.02
SMPD1-209ENST00000533196 LRRC41Q15345 812 aa27.63■■■□□ 2.01
SMPD1-209ENST00000533196 ANO1Q5XXA6 986 aa27.63■■■□□ 2.01
SMPD1-209ENST00000533196 BTNL9Q6UXG8 535 aa27.63■■■□□ 2.01
SMPD1-209ENST00000533196 TBC1D10CQ8IV04 446 aa27.63■■■□□ 2.01
SMPD1-209ENST00000533196 ESR2Q92731 530 aa27.63■■■□□ 2.01
SMPD1-209ENST00000533196 RANBP2P49792 3224 aaKnown RBP27.63■■■□□ 2.01
SMPD1-209ENST00000533196 MCM3APO60318 1980 aa27.62■■■□□ 2.01
SMPD1-209ENST00000533196 CCDC96Q2M329 555 aa27.62■■■□□ 2.01
SMPD1-209ENST00000533196 CCDC178Q5BJE1 867 aa27.62■■■□□ 2.01
SMPD1-209ENST00000533196 XPNPEP3Q9NQH7 507 aa27.62■■■□□ 2.01
SMPD1-209ENST00000533196 RNF146Q9NTX7 359 aa27.62■■■□□ 2.01
SMPD1-209ENST00000533196 SNAI1O95863 264 aaPredicted RBP27.61■■■□□ 2.01
SMPD1-209ENST00000533196 TAL1P17542 331 aaPredicted RBP27.61■■■□□ 2.01
SMPD1-209ENST00000533196 RNF180Q86T96 592 aa27.61■■■□□ 2.01
SMPD1-209ENST00000533196 AGBL1Q96MI9 1066 aa27.61■■■□□ 2.01
SMPD1-209ENST00000533196 CTNNA3Q9UI47 895 aa27.61■■■□□ 2.01
SMPD1-209ENST00000533196 SYN1P17600 705 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 PDE4AP27815 886 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 TTC22Q5TAA0 569 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 TRERF1Q96PN7 1200 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 ABHD16BQ9H3Z7 469 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 HOMER2Q9NSB8 354 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 PNMA2Q9UL42 364 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 FAM184BQ9ULE4 1060 aa27.6■■■□□ 2.01
SMPD1-209ENST00000533196 C1orf53Q5VUE5 145 aa27.59■■■□□ 2.01
SMPD1-209ENST00000533196 DGKHQ86XP1 1220 aa27.59■■■□□ 2.01
SMPD1-209ENST00000533196 CHMP4CQ96CF2 233 aa27.59■■■□□ 2.01
SMPD1-209ENST00000533196 RANBP17Q9H2T7 1088 aaKnown RBP27.59■■■□□ 2.01
SMPD1-209ENST00000533196 A1CFQ9NQ94 594 aaKnown RBP27.59■■■□□ 2.01
SMPD1-209ENST00000533196 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.59■■■□□ 2.01
SMPD1-209ENST00000533196 PHF24Q9UPV7 400 aa27.59■■■□□ 2.01
SMPD1-209ENST00000533196 MTMR7Q9Y216 660 aa27.59■■■□□ 2.01
SMPD1-209ENST00000533196 POTEB2H3BUK9 544 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 ICAM1P05362 532 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 ALAS1P13196 640 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 ATN1P54259 1190 aaPredicted RBP27.58■■■□□ 2.01
SMPD1-209ENST00000533196 RTP1P59025 263 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 SNX17Q15036 470 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 IMMTQ16891 758 aaKnown RBP27.58■■■□□ 2.01
SMPD1-209ENST00000533196 CCDC174Q6PII3 467 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 SLC39A5Q6ZMH5 540 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 RASGRP2Q7LDG7 609 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 IQCA1Q86XH1 822 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 FAM133AQ8N9E0 248 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 FGD4Q96M96 766 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 NEDD4P46934 1319 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 RAD50Q92878 1312 aa27.58■■■□□ 2.01
SMPD1-209ENST00000533196 MYCNP04198 464 aaPredicted RBP27.57■■■□□ 2
SMPD1-209ENST00000533196 PDHBP11177 359 aa27.57■■■□□ 2
SMPD1-209ENST00000533196 MAGEA10P43363 369 aaPredicted RBP27.57■■■□□ 2
SMPD1-209ENST00000533196 ACVR2BQ13705 512 aa27.57■■■□□ 2
SMPD1-209ENST00000533196 SYDE2Q5VT97 1194 aa27.57■■■□□ 2
SMPD1-209ENST00000533196 ARMCX2Q7L311 632 aa27.57■■■□□ 2
SMPD1-209ENST00000533196 ZHX1Q9UKY1 873 aaPredicted RBP27.57■■■□□ 2
SMPD1-209ENST00000533196 CCPG1Q9ULG6 757 aa27.57■■■□□ 2
SMPD1-209ENST00000533196 SNHG28P0DPA3 235 aa27.56■■■□□ 2
SMPD1-209ENST00000533196 ADCYAP1R1P41586 468 aa27.56■■■□□ 2
SMPD1-209ENST00000533196 TSEN34Q9BSV6 310 aaKnown RBP27.56■■■□□ 2
SMPD1-209ENST00000533196 ASB14A6NK59 587 aa27.55■■■□□ 2
SMPD1-209ENST00000533196 ADAMTS4O75173 837 aa27.55■■■□□ 2
SMPD1-209ENST00000533196 DUSP11O75319 330 aaKnown RBP27.55■■■□□ 2
SMPD1-209ENST00000533196 GSPT1P15170 499 aaKnown RBP27.55■■■□□ 2
SMPD1-209ENST00000533196 ZNF543Q08ER8 600 aa27.55■■■□□ 2
SMPD1-209ENST00000533196 TTBK2Q6IQ55 1244 aa27.55■■■□□ 2
SMPD1-209ENST00000533196 PRKAG2Q9UGJ0 569 aa27.55■■■□□ 2
SMPD1-209ENST00000533196 PGK1P00558 417 aa27.54■■■□□ 2
SMPD1-209ENST00000533196 IRX6P78412 446 aaPredicted RBP27.54■■■□□ 2
SMPD1-209ENST00000533196 GPATCH4Q5T3I0 446 aaKnown RBP27.54■■■□□ 2
SMPD1-209ENST00000533196 RUFY2Q8WXA3 655 aa27.54■■■□□ 2
SMPD1-209ENST00000533196 ANKS1AQ92625 1134 aa27.54■■■□□ 2
SMPD1-209ENST00000533196 KRT23Q9C075 422 aa27.54■■■□□ 2
SMPD1-209ENST00000533196 CNNM2Q9H8M5 875 aa27.54■■■□□ 2
SMPD1-209ENST00000533196 FRMPD2Q68DX3 1309 aaPredicted RBP27.53■■■□□ 2
SMPD1-209ENST00000533196 KDM4AO75164 1064 aa27.53■■■□□ 2
SMPD1-209ENST00000533196 SLC16A2P36021 539 aa27.53■■■□□ 2
SMPD1-209ENST00000533196 CCDC144CPQ8IYA2 1237 aa27.53■■■□□ 2
SMPD1-209ENST00000533196 UBE2OQ9C0C9 1292 aaKnown RBP27.53■■■□□ 2
SMPD1-209ENST00000533196 GPCPD1Q9NPB8 672 aa27.53■■■□□ 2
SMPD1-209ENST00000533196 CYP39A1Q9NYL5 469 aa27.53■■■□□ 2
SMPD1-209ENST00000533196 ATP11BQ9Y2G3 1177 aa27.53■■■□□ 2
SMPD1-209ENST00000533196 SYNRGQ9UMZ2 1314 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 MOXD2PA6NHM9 499 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 SNAP25P60880 206 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 CNTN2Q02246 1040 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 MUM1L1Q5H9M0 696 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 TDHQ8IZJ6 230 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 KLHDC9Q8NEP7 349 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 KATNBL1Q9H079 304 aa27.52■■■□□ 2
SMPD1-209ENST00000533196 WDR19Q8NEZ3 1342 aa27.51■■□□□ 1.99
SMPD1-209ENST00000533196 LOC102724159A0A0B4J2E5 919 aa27.51■■□□□ 1.99
SMPD1-209ENST00000533196 SOWAHBA6NEL2 793 aa27.51■■□□□ 1.99
SMPD1-209ENST00000533196 CST5P28325 142 aaPredicted RBP27.51■■□□□ 1.99
SMPD1-209ENST00000533196 PWP2Q15269 919 aaKnown RBP27.51■■□□□ 1.99
SMPD1-209ENST00000533196 CCDC144BQ3MJ40 725 aa27.51■■□□□ 1.99
SMPD1-209ENST00000533196 FERMT2Q96AC1 680 aa27.51■■□□□ 1.99
SMPD1-209ENST00000533196 ZSCAN10Q96SZ4 725 aaPredicted RBP27.51■■□□□ 1.99
SMPD1-209ENST00000533196 LBHD1Q9BQE6 289 aaPredicted RBP27.51■■□□□ 1.99
SMPD1-209ENST00000533196 ZKSCAN3Q9BRR0 538 aa27.51■■□□□ 1.99
SMPD1-209ENST00000533196 SPC25Q9HBM1 224 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms