RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 SNX17Q15036 470 aa21.07■□□□□ 0.96
PCF11-206ENST00000533018 RCSD1Q6JBY9 416 aa21.07■□□□□ 0.96
PCF11-206ENST00000533018 ZNF467Q7Z7K2 595 aaPredicted RBP21.07■□□□□ 0.96
PCF11-206ENST00000533018 RWDD1Q9H446 243 aaPredicted RBP21.07■□□□□ 0.96
PCF11-206ENST00000533018 ACAD9Q9H845 621 aa21.07■□□□□ 0.96
PCF11-206ENST00000533018 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.07■□□□□ 0.96
PCF11-206ENST00000533018 ANAPC4Q9UJX5 808 aa21.07■□□□□ 0.96
PCF11-206ENST00000533018 A0A0D9SFI3 127 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 POTEB2H3BUK9 544 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 PQBP1O60828 265 aaKnown RBP21.06■□□□□ 0.96
PCF11-206ENST00000533018 ALAS1P13196 640 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 SNAP25P60880 206 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 CCDC96Q2M329 555 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 C1orf53Q5VUE5 145 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 SH3RF1Q7Z6J0 888 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 BADQ92934 168 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 ABHD16BQ9H3Z7 469 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 PDLIM7Q9NR12 457 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 RNF146Q9NTX7 359 aa21.06■□□□□ 0.96
PCF11-206ENST00000533018 SYNRGQ9UMZ2 1314 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 ADAMTS4O75173 837 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 FGAP02671 866 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 CNTN2Q02246 1040 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 NMIQ13287 307 aaPredicted RBP21.05■□□□□ 0.96
PCF11-206ENST00000533018 ALX1Q15699 326 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 ARMCX2Q7L311 632 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 NUP133Q8WUM0 1156 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 TRERF1Q96PN7 1200 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 TSEN34Q9BSV6 310 aaKnown RBP21.05■□□□□ 0.96
PCF11-206ENST00000533018 SPC25Q9HBM1 224 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 STARD7Q9NQZ5 370 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 TACC3Q9Y6A5 838 aa21.05■□□□□ 0.96
PCF11-206ENST00000533018 TRIM43BA6NCK2 446 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 ORC4O43929 436 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 DUSP11O75319 330 aaKnown RBP21.04■□□□□ 0.96
PCF11-206ENST00000533018 CLTBP09497 229 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 C6orf222P0C671 652 aaPredicted RBP21.04■□□□□ 0.96
PCF11-206ENST00000533018 HSPD1P10809 573 aaKnown RBP21.04■□□□□ 0.96
PCF11-206ENST00000533018 ACLYP53396 1101 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 AAMPQ13685 434 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 KCNA10Q16322 511 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 CCDC144BQ3MJ40 725 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.04■□□□□ 0.96
PCF11-206ENST00000533018 RASGRP2Q7LDG7 609 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 CCDC144CPQ8IYA2 1237 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 SLC17A8Q8NDX2 589 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 VTI1AQ96AJ9 217 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 TRIM43Q96BQ3 446 aaPredicted RBP21.04■□□□□ 0.96
PCF11-206ENST00000533018 PRR12Q9ULL5 1215 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 ZNF536O15090 1300 aa21.04■□□□□ 0.96
PCF11-206ENST00000533018 MOXD2PA6NHM9 499 aa21.03■□□□□ 0.96
PCF11-206ENST00000533018 HAND2P61296 217 aa21.03■□□□□ 0.96
PCF11-206ENST00000533018 TKFCQ3LXA3 575 aa21.03■□□□□ 0.96
PCF11-206ENST00000533018 NOL8Q76FK4 1167 aaKnown RBP21.03■□□□□ 0.96
PCF11-206ENST00000533018 FGD4Q96M96 766 aa21.03■□□□□ 0.96
PCF11-206ENST00000533018 A1CFQ9NQ94 594 aaKnown RBP21.03■□□□□ 0.96
PCF11-206ENST00000533018 PLA2G6O60733 806 aa21.02■□□□□ 0.96
PCF11-206ENST00000533018 SHHQ15465 462 aa21.02■□□□□ 0.96
PCF11-206ENST00000533018 ZNF589Q86UQ0 364 aaPredicted RBP21.02■□□□□ 0.96
PCF11-206ENST00000533018 DCAF4Q8WV16 495 aa21.02■□□□□ 0.96
PCF11-206ENST00000533018 TMEM39AQ9NV64 488 aa21.02■□□□□ 0.96
PCF11-206ENST00000533018 CCPG1Q9ULG6 757 aa21.02■□□□□ 0.96
PCF11-206ENST00000533018 CCDC171Q6TFL3 1326 aa21.02■□□□□ 0.95
PCF11-206ENST00000533018 MYADML2A6NDP7 307 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 RAG1P15918 1043 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 SLC16A2P36021 539 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 MFAP1P55081 439 aaKnown RBP21.01■□□□□ 0.95
PCF11-206ENST00000533018 GNASQ5JWF2 1037 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 CHD1LQ86WJ1 897 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 TICAM2Q86XR7 235 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 PCSK9Q8NBP7 692 aaKnown RBP21.01■□□□□ 0.95
PCF11-206ENST00000533018 KLHDC9Q8NEP7 349 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 GLT1D1Q96MS3 346 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 MTMR10Q9NXD2 777 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 A0A0C4DFX4 3053 aa21.01■□□□□ 0.95
PCF11-206ENST00000533018 FRMPD2Q68DX3 1309 aaPredicted RBP21.01■□□□□ 0.95
PCF11-206ENST00000533018 ASB14A6NK59 587 aa21■□□□□ 0.95
PCF11-206ENST00000533018 DCDC2CA8MYV0 355 aa21■□□□□ 0.95
PCF11-206ENST00000533018 FGRP09769 529 aa21■□□□□ 0.95
PCF11-206ENST00000533018 TOP1P11387 765 aaKnown RBP21■□□□□ 0.95
PCF11-206ENST00000533018 IRX5P78411 483 aaPredicted RBP21■□□□□ 0.95
PCF11-206ENST00000533018 MUM1L1Q5H9M0 696 aa21■□□□□ 0.95
PCF11-206ENST00000533018 C9orf50Q5SZB4 431 aa21■□□□□ 0.95
PCF11-206ENST00000533018 TTBK2Q6IQ55 1244 aa21■□□□□ 0.95
PCF11-206ENST00000533018 NSMFQ6X4W1 530 aa21■□□□□ 0.95
PCF11-206ENST00000533018 MFSD6Q6ZSS7 791 aa21■□□□□ 0.95
PCF11-206ENST00000533018 SMC5Q8IY18 1101 aa21■□□□□ 0.95
PCF11-206ENST00000533018 FAM133AQ8N9E0 248 aa21■□□□□ 0.95
PCF11-206ENST00000533018 FAM161BQ96MY7 647 aa21■□□□□ 0.95
PCF11-206ENST00000533018 TMEM47Q9BQJ4 181 aa21■□□□□ 0.95
PCF11-206ENST00000533018 GPCPD1Q9NPB8 672 aa21■□□□□ 0.95
PCF11-206ENST00000533018 SOWAHBA6NEL2 793 aa20.99■□□□□ 0.95
PCF11-206ENST00000533018 ADCY6O43306 1168 aa20.99■□□□□ 0.95
PCF11-206ENST00000533018 IGHDP01880 384 aa20.99■□□□□ 0.95
PCF11-206ENST00000533018 ASGR1P07306 291 aa20.99■□□□□ 0.95
PCF11-206ENST00000533018 SDSP20132 328 aa20.99■□□□□ 0.95
PCF11-206ENST00000533018 ICAM1P05362 532 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 NOVP48745 357 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 GJA9P57773 515 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 TNFAIP2Q03169 654 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms