RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 CHST13Q8NET6 341 aa20.29■□□□□ 0.84
RPUSD4-207ENST00000532800 TSEN34Q9BSV6 310 aaKnown RBP20.29■□□□□ 0.84
RPUSD4-207ENST00000532800 FBXO40Q9UH90 709 aa20.29■□□□□ 0.84
RPUSD4-207ENST00000532800 EYSQ5T1H1 3165 aa20.29■□□□□ 0.84
RPUSD4-207ENST00000532800 NMT2O60551 498 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 MCCP23508 829 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 EPHB4P54760 987 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 KCNA10Q16322 511 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 ARMCX2Q7L311 632 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 GMCL1Q96IK5 515 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 AGBL1Q96MI9 1066 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 CRBNQ96SW2 442 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 STARD7Q9NQZ5 370 aa20.28■□□□□ 0.84
RPUSD4-207ENST00000532800 ZNF536O15090 1300 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 LRRC37A2A6NM11 1700 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 TSPY2A6NKD2 308 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 KIAA0355O15063 1070 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 DUSP11O75319 330 aaKnown RBP20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 SLC1A4P43007 532 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 CNTN2Q02246 1040 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 IKQ13123 557 aaPredicted RBP20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 CCDC144BQ3MJ40 725 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 ZNF697Q5TEC3 545 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 ANKRD45Q5TZF3 282 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 KCTD1Q719H9 257 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 IL17RBQ9NRM6 502 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 RNF146Q9NTX7 359 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 STX8Q9UNK0 236 aa20.27■□□□□ 0.84
RPUSD4-207ENST00000532800 MOXD2PA6NHM9 499 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 C6orf222P0C671 652 aaPredicted RBP20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 RAG1P15918 1043 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 SNAP25P60880 206 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 FAAP100Q0VG06 881 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 FAM160B2Q86V87 743 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 CCDC144CPQ8IYA2 1237 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 STAG1Q8WVM7 1258 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 KATNBL1Q9H079 304 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 ABHD16BQ9H3Z7 469 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 ACAD9Q9H845 621 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 A1CFQ9NQ94 594 aaKnown RBP20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 TMEM39AQ9NV64 488 aa20.26■□□□□ 0.83
RPUSD4-207ENST00000532800 FDX1P10109 184 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 CST5P28325 142 aaPredicted RBP20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 CCDC174Q6PII3 467 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 ANKRD33Q7Z3H0 272 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 FAM133AQ8N9E0 248 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 CHURC1Q8WUH1 139 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 NUP133Q8WUM0 1156 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 MTMR7Q9Y216 660 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 DDX49Q9Y6V7 483 aaKnown RBP20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 CDH23Q9H251 3354 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 LCTP09848 1927 aa20.25■□□□□ 0.83
RPUSD4-207ENST00000532800 SOWAHBA6NEL2 793 aa20.24■□□□□ 0.83
RPUSD4-207ENST00000532800 RANBP6O60518 1105 aaKnown RBP20.24■□□□□ 0.83
RPUSD4-207ENST00000532800 EVI5LQ96CN4 794 aa20.24■□□□□ 0.83
RPUSD4-207ENST00000532800 UPF3AQ9H1J1 476 aaKnown RBP20.24■□□□□ 0.83
RPUSD4-207ENST00000532800 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
RPUSD4-207ENST00000532800 ANAPC4Q9UJX5 808 aa20.24■□□□□ 0.83
RPUSD4-207ENST00000532800 ASTN1O14525 1302 aa20.24■□□□□ 0.83
RPUSD4-207ENST00000532800 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 ASGR1P07306 291 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 ALAS1P13196 640 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 PDE1AP54750 535 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 GJA9P57773 515 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 MUM1L1Q5H9M0 696 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 RCSD1Q6JBY9 416 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 RNPC3Q96LT9 517 aaKnown RBP20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 FAM227BQ96M60 508 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 GLT1D1Q96MS3 346 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 TOX2Q96NM4 488 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 TRERF1Q96PN7 1200 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 PRR12Q9ULL5 1215 aa20.23■□□□□ 0.83
RPUSD4-207ENST00000532800 A0A0D9SFI3 127 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 DCDC2CA8MYV0 355 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 CTAGE5O15320 804 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 PLA2G6O60733 806 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 PTGS1P23219 599 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 SMAD3P84022 425 aaKnown RBP20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 FPGSQ05932 587 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 PPP4R3BQ5MIZ7 849 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 TTYH1Q9H313 450 aaPredicted RBP20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 SPC25Q9HBM1 224 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 TBX21Q9UL17 535 aa20.22■□□□□ 0.83
RPUSD4-207ENST00000532800 ORC4O43929 436 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 NOVP48745 357 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 CDK7P50613 346 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 BEX3Q00994 111 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 GNASQ5JWF2 1037 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 PCSK9Q8NBP7 692 aaKnown RBP20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 CDX2Q99626 313 aaPredicted RBP20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 SEMA6BQ9H3T3 888 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 ELP1O95163 1332 aa20.21■□□□□ 0.83
RPUSD4-207ENST00000532800 CUL9Q8IWT3 2517 aa20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 PRUNE2Q8WUY3 3088 aa20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 HDAC1Q13547 482 aaPredicted RBP20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 ALX1Q15699 326 aa20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms