RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 POLLQ9UGP5 575 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 RGPD2P0DJD1 1756 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 A0A0D9SFI3 127 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 TSPY2A6NKD2 308 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 ECE2O60344 883 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 POLE2P56282 527 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 PDCLQ13371 301 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 SAMD7Q7Z3H4 446 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 REXO1L1PQ8IX06 675 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC170Q8IYT3 715 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 CCHCR1Q8TD31 782 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 CD209Q9NNX6 404 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 H7C1D1 291 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 HIP1RO75146 1068 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 IRAK1P51617 712 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 MAP3K9P80192 1104 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 CTDSPL2Q05D32 466 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 SEPT14Q6ZU15 432 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 CACNA2D4Q7Z3S7 1137 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 ZNF444Q8N0Y2 327 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 THOC1Q96FV9 657 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 FAM84BQ96KN1 310 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 UBAC1Q9BSL1 405 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 TDRD3Q9H7E2 651 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 PIH1D3Q9NQM4 214 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 ANAPC4Q9UJX5 808 aa7.54□□□□□ -1.2
TGFBR3-209ENST00000532540 GPAA1O43292 621 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 AP1G2O75843 785 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 LDHCP07864 332 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 GBP1P32455 592 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 CYLC1P35663 651 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 KRT83P78385 493 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 CCDC122Q5T0U0 273 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 IFT81Q8WYA0 676 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 ITFG2Q969R8 447 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 KAT14Q9H8E8 782 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 TPCN1Q9ULQ1 816 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 G3BP2Q9UN86 482 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SAR1BQ9Y6B6 198 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 AKAP12Q02952 1782 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 A0A087WWV3 80 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 RNF113AO15541 343 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SLC8A3P57103 927 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 UBE4AQ14139 1066 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 TTF1Q15361 905 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SPTY2D1Q68D10 685 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 LRRN4CLQ8ND94 238 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 GBP5Q96PP8 586 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 VCX3BQ9H321 246 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 VCX3AQ9NNX9 186 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 CETN3O15182 167 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 EIF3HO15372 352 aaKnown RBP eCLIP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 TACC1O75410 805 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SKAP2O75563 359 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 DDNO94850 711 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SH3BGRP55822 239 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 ME3Q16798 604 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 KCTD16Q68DU8 428 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 ARMCX5Q6P1M9 558 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 LRP10Q7Z4F1 713 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 MICU3Q86XE3 530 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 TMTC1Q8IUR5 882 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SLC35F6Q8N357 371 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 CRNKL1Q9BZJ0 848 aaKnown RBP7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 VIPAS39Q9H9C1 493 aa7.53□□□□□ -1.2
TGFBR3-209ENST00000532540 PDE6AP16499 860 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 GGCXP38435 758 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 DNA2P51530 1060 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 VSNL1P62760 191 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 CUL3Q13618 768 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 PREPLQ4J6C6 727 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 FAM47AQ5JRC9 791 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 BEND6Q5SZJ8 279 aaPredicted RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 C9orf131Q5VYM1 1079 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 CIAPIN1Q6FI81 312 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 HOOK2Q96ED9 719 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 DDX27Q96GQ7 796 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 NEK1Q96PY6 1258 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 WDR24Q96S15 920 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 FZD1Q9UP38 647 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 USP17L12C9JPN9 530 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 USP17L21D6R901 530 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 SLURP2P0DP57 97 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 DESP17661 470 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 BTDP43251 543 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 APBA1Q02410 837 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 GOLGA8FQ08AF8 430 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 GOLGA8DPQ0D2H9 430 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 DYNC1I2Q13409 638 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 DRP2Q13474 957 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 IQCB1Q15051 598 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 TAF11Q15544 211 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC96Q2M329 555 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 MCMDC2Q4G0Z9 681 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 FKBP15Q5T1M5 1219 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 RCSD1Q6JBY9 416 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms