RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 KCNA1Q09470 495 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 RRS1Q15050 365 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 TCP11X2Q5H9J9 407 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 LDHAL6AQ6ZMR3 332 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 ZBTB18Q99592 522 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 EIF3CQ99613 913 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 INTUQ9ULD6 942 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 RBM8AQ9Y5S9 174 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 SLC4A4Q9Y6R1 1079 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 TOP2AP11388 1531 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 VWA3AA6NCI4 1184 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 POC1B-GALNT4F8VUJ3 575 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 MAPK13O15264 365 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 LZTS3O60299 673 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 SRGAP2BP0DMP2 458 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 SLC44A4Q53GD3 710 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 DEPDC1Q5TB30 811 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 NOP9Q86U38 636 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 LRRC2Q9BYS8 371 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 TMEM245Q9H330 911 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 KIF9Q9HAQ2 790 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 SMCO2A6NFE2 343 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 CTNND1O60716 968 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 MTRF1O75570 445 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 MAGEA9P43362 315 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 UBE3AQ05086 875 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 TBC1D10BQ4KMP7 808 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 TAGAPQ8N103 731 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 SNX29Q8TEQ0 813 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 NCLNQ969V3 563 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 PRAM1Q96QH2 718 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 RPS6KC1Q96S38 1066 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 CABP1Q9NZU7 370 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 SUN2Q9UH99 717 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 RASSF9O75901 435 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 ATP5HO75947 161 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 RINT1Q6NUQ1 792 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 UHMK1Q8TAS1 419 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 OMA1Q96E52 524 aa8.84□□□□□ -0.99
CTNND1-231ENST00000532463 INTS4Q96HW7 963 aaKnown RBP8.84□□□□□ -0.99
CTNND1-231ENST00000532463 VCAM1P19320 739 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 GUCY1A3Q02108 690 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 PSMD2Q13200 908 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 BTN2A1Q7KYR7 527 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 ST13P5Q8NFI4 369 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 PARD3BQ8TEW8 1205 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 PLEKHA4Q9H4M7 779 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 TRIM45Q9H8W5 580 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 PARVBQ9HBI1 364 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 C6orf203Q9P0P8 240 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 MBD2Q9UBB5 411 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 PTPRCP08575 1304 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 NUTM2BA6NNL0 878 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 NUTM2EB1AL46 878 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 DCTN3O75935 186 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 NCF2P19878 526 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 SERPINB1P30740 379 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 OCRLQ01968 901 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 CNGA2Q16280 664 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 MCMDC2Q4G0Z9 681 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 KCTD16Q68DU8 428 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 SIKE1Q9BRV8 207 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 TRPV6Q9H1D0 765 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 GEMIN8Q9NWZ8 242 aaKnown RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 RNF103-CHMP3A0A140T963 221 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 F6X3S4 739 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 CUL3Q13618 768 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 PUM3Q15397 648 aaKnown RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 ALS2CLQ60I27 953 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 KSR1Q8IVT5 923 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 EXOC3O60645 756 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 STAM2O75886 525 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 STAT1P42224 750 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 NSFP46459 744 aaKnown RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 AP1B1Q10567 949 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 TYW1BQ6NUM6 668 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 EXOC4Q96A65 974 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 ZFYVE19Q96K21 471 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 NLRP4Q96MN2 994 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 KLC2Q9H0B6 622 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 PRG3Q9Y2Y8 225 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 ABCC11Q96J66 1382 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 PTPDC1A2A3K4 754 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 LPXNO60711 386 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 PRPF6O94906 941 aaKnown RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 GNA14O95837 355 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 RPN1P04843 607 aaKnown RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 SLC9A1P19634 815 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 MTX1Q13505 466 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 NCAPG2Q86XI2 1143 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 BBS5Q8N3I7 341 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 SYT2Q8N9I0 419 aaPredicted RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 TTLL11Q8NHH1 800 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 U2AF1L4Q8WU68 220 aaKnown RBP8.83□□□□□ -1
CTNND1-231ENST00000532463 RAD21L1Q9H4I0 556 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 SYBUQ9NX95 663 aa8.83□□□□□ -1
CTNND1-231ENST00000532463 TAB2Q9NYJ8 693 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms