RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-221ENST00000532331 HS1BP3Q53T59 392 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 LRCH2Q5VUJ6 765 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 CAPZA3Q96KX2 299 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 DMP1Q13316 513 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-221ENST00000532331 FASTKD5Q7L8L6 764 aaKnown RBP12.52□□□□□ -0.41
PTPRK-221ENST00000532331 NELFCDQ8IXH7 590 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 BAG1Q99933 345 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-221ENST00000532331 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 USP17L2Q6R6M4 530 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 NSRP1Q9H0G5 558 aaKnown RBP12.52□□□□□ -0.41
PTPRK-221ENST00000532331 CLSTN2Q9H4D0 955 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 MTUS1Q9ULD2 1270 aa12.52□□□□□ -0.41
PTPRK-221ENST00000532331 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 TNNC2P02585 160 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 OR52Z1P0C646 297 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 DAPK3O43293 454 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 ADD1P35611 737 aaKnown RBP12.51□□□□□ -0.41
PTPRK-221ENST00000532331 C6orf163Q5TEZ5 329 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 LIN9Q5TKA1 542 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 MED10Q9BTT4 135 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 CPDO75976 1380 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 QRICH2Q9H0J4 1663 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 DLC1Q96QB1 1528 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 MYL3P08590 195 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 MFSD14CQ5VZR4 134 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 PNMA8AQ86V59 439 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-221ENST00000532331 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 MAPK8IP1Q9UQF2 711 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 IGKV5-2P06315 115 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 PRDX5P30044 214 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 TNNC1P63316 161 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 CCDC122Q5T0U0 273 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-221ENST00000532331 SLC7A3Q8WY07 619 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 SLF1Q9BQI6 1058 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
PTPRK-221ENST00000532331 JAK2O60674 1132 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 RNASELQ05823 741 aaKnown RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 PAK1Q13153 545 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 MCM6Q14566 821 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 PPP2R5AQ15172 486 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 IGSF22Q8N9C0 903 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 VPS16Q9H269 839 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 CNTNAP4Q9C0A0 1308 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 SETBP1Q9Y6X0 1596 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 K7ENM7 598 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 RAET1EQ8TD07 263 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 SYNRGQ9UMZ2 1314 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 DCCP43146 1447 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 FRMPD1Q5SYB0 1578 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 XPOTO43592 962 aaKnown RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 SEL1L2Q5TEA6 688 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 KRT222Q8N1A0 295 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 PAIP2Q9BPZ3 127 aaKnown RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 PUS7LQ9H0K6 701 aaKnown RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 LARSQ9P2J5 1176 aaKnown RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 LEO1Q8WVC0 666 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 PIGSQ96S52 555 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 PPP1R9BQ96SB3 815 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 MTRF1LQ9UGC7 380 aaKnown RBP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRK-221ENST00000532331 RNF207Q6ZRF8 634 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 NOSTRINQ8IVI9 506 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 TBC1D16Q8TBP0 767 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 PRDM10Q9NQV6 1147 aa12.5□□□□□ -0.41
PTPRK-221ENST00000532331 MROH7-TTC4A0A0A0MT08 1334 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 GAS8O95995 478 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 SPP2Q13103 211 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 CDC37Q16543 378 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-221ENST00000532331 STAP2Q9UGK3 403 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 NUB1Q9Y5A7 615 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 RPAP1Q9BWH6 1393 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-221ENST00000532331 ZNF202O95125 648 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
PTPRK-221ENST00000532331 CLCN1P35523 988 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 PPP1R7Q15435 360 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTPRK-221ENST00000532331 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 LMNB1P20700 586 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 MCAMP43121 646 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 NT5C2P49902 561 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 SYT10Q6XYQ8 523 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 DCAF4Q8WV16 495 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 KCNH4Q9UQ05 1017 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 ABL1P00519 1130 aa12.49□□□□□ -0.41
PTPRK-221ENST00000532331 TUBBP07437 444 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms