RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 SIK1P57059 783 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 PTGDRQ13258 359 aa16.67■□□□□ 0.26
NXF1-213ENST00000532297 TARSL2A2RTX5 802 aaKnown RBP16.66■□□□□ 0.26
NXF1-213ENST00000532297 GOLGA6BA6NDN3 693 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 KRT31Q15323 416 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 MTRQ99707 1265 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 EPN1Q9Y6I3 576 aaPredicted RBP16.66■□□□□ 0.26
NXF1-213ENST00000532297 PP2D1A8MPX8 630 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 PPP1R3GB7ZBB8 358 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 PSMD14O00487 310 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 NDUFA10O95299 355 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 PRDX5P30044 214 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 GSCP56915 257 aaPredicted RBP16.66■□□□□ 0.26
NXF1-213ENST00000532297 CAPS2Q9BXY5 557 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 CXorf56Q9H5V9 222 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
NXF1-213ENST00000532297 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 SHTN1A0MZ66 631 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 XBP1P17861 261 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 TROAPQ12815 778 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 PPFIA1Q13136 1202 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 ANKRD20A12PQ8NF67 263 aa16.66■□□□□ 0.26
NXF1-213ENST00000532297 RNF26Q9BY78 433 aaPredicted RBP16.66■□□□□ 0.26
NXF1-213ENST00000532297 CNTNAP5Q8WYK1 1306 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 INPP5BP32019 993 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 MAP2K2P36507 400 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 TTC38Q5R3I4 469 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 CCNI2Q6ZMN8 369 aaPredicted RBP16.65■□□□□ 0.26
NXF1-213ENST00000532297 PTF1AQ7RTS3 328 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 FAM205AQ6ZU69 1335 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 A0A1B0GUL6 1792 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 MMP14P50281 582 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 RCAN1P53805 252 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 KCNV1Q6PIU1 500 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 CATIPQ7Z7H3 387 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 CAGE1Q8TC20 777 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 HAUS4Q9H6D7 363 aa16.65■□□□□ 0.26
NXF1-213ENST00000532297 TRIM49BA6NDI0 452 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 USP8P40818 1118 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 GNGT1P63211 74 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 CKAP4Q07065 602 aaKnown RBP16.64■□□□□ 0.25
NXF1-213ENST00000532297 CCDC122Q5T0U0 273 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 GPIHBP1Q8IV16 184 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 MARCH10Q8NA82 808 aaPredicted RBP16.64■□□□□ 0.25
NXF1-213ENST00000532297 SECISBP2LQ93073 1101 aaKnown RBP16.64■□□□□ 0.25
NXF1-213ENST00000532297 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 TRIM14Q14142 442 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 TTC19Q6DKK2 380 aaPredicted RBP16.64■□□□□ 0.25
NXF1-213ENST00000532297 TXNRD3Q86VQ6 643 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 RTL9Q8NET4 1388 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 TNFRSF25Q93038 417 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 JAKMIP2Q96AA8 810 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 FAM84BQ96KN1 310 aaPredicted RBP16.64■□□□□ 0.25
NXF1-213ENST00000532297 RPGRIP1Q96KN7 1286 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 GSDMAQ96QA5 445 aa16.64■□□□□ 0.25
NXF1-213ENST00000532297 LIMA1Q9UHB6 759 aaKnown RBP16.64■□□□□ 0.25
NXF1-213ENST00000532297 EIF3HO15372 352 aaKnown RBP eCLIP16.63■□□□□ 0.259e-8■■■□□ 18.9
NXF1-213ENST00000532297 COPB1P53618 953 aaKnown RBP16.63■□□□□ 0.25
NXF1-213ENST00000532297 SAMM50Q9Y512 469 aa16.63■□□□□ 0.25
NXF1-213ENST00000532297 PSEN1P49768 467 aa16.63■□□□□ 0.25
NXF1-213ENST00000532297 MECOMQ03112 1051 aa16.63■□□□□ 0.25
NXF1-213ENST00000532297 RRAGBQ5VZM2 374 aa16.63■□□□□ 0.25
NXF1-213ENST00000532297 PAPD7Q5XG87 772 aaKnown RBP16.63■□□□□ 0.25
NXF1-213ENST00000532297 TMTC3Q6ZXV5 915 aa16.63■□□□□ 0.25
NXF1-213ENST00000532297 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
NXF1-213ENST00000532297 SH3RF1Q7Z6J0 888 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 DYNLL2Q96FJ2 89 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 GPR101Q96P66 508 aaPredicted RBP16.62■□□□□ 0.25
NXF1-213ENST00000532297 MINPP1Q9UNW1 487 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 ZNF804BA4D1E1 1349 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 GRIN2DO15399 1336 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 ZNF185O15231 689 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 USP17L8P0C7I0 530 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 NLRP5P59047 1200 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
NXF1-213ENST00000532297 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
NXF1-213ENST00000532297 LRRC10BA6NIK2 292 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 PRPF3O43395 683 aaKnown RBP16.61■□□□□ 0.25
NXF1-213ENST00000532297 UBXN1Q04323 297 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 PPP2R5BQ15173 497 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 DDB1Q16531 1140 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 GBP6Q6ZN66 633 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 GNL3LQ9NVN8 582 aaKnown RBP16.61■□□□□ 0.25
NXF1-213ENST00000532297 HERVK_113P62684 666 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 SND1Q7KZF4 910 aaKnown RBP eCLIP16.61■□□□□ 0.25
NXF1-213ENST00000532297 IQCA1Q86XH1 822 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
NXF1-213ENST00000532297 FAM184BQ9ULE4 1060 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 CAPN7Q9Y6W3 813 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
NXF1-213ENST00000532297 KCNJ18B7U540 433 aa16.6■□□□□ 0.25
NXF1-213ENST00000532297 KCNJ12Q14500 433 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms