RNA–Protein interactions for RNA: ENST00000532138.1

SCN4B-206, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4

Gene SCN4B, Length 850 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-206ENST00000532138 ST18O60284 1047 aa23.3■■□□□ 1.32
SCN4B-206ENST00000532138 PEX10O60683 326 aa23.3■■□□□ 1.32
SCN4B-206ENST00000532138 Q3C1V9 767 aa23.3■■□□□ 1.32
SCN4B-206ENST00000532138 ZNF296Q8WUU4 475 aaPredicted RBP23.3■■□□□ 1.32
SCN4B-206ENST00000532138 LARP6Q9BRS8 491 aaKnown RBP23.3■■□□□ 1.32
SCN4B-206ENST00000532138 TPCN1Q9ULQ1 816 aa23.3■■□□□ 1.32
SCN4B-206ENST00000532138 SMCHD1A6NHR9 2005 aa23.3■■□□□ 1.32
SCN4B-206ENST00000532138 DOCK3Q8IZD9 2030 aa23.3■■□□□ 1.32
SCN4B-206ENST00000532138 DHX16O60231 1041 aaKnown RBP23.29■■□□□ 1.32
SCN4B-206ENST00000532138 PLEKHA8P1O95397 391 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 COPB2P35606 906 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 SLC35G1Q2M3R5 365 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 MTMR8Q96EF0 704 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 ERO1AQ96HE7 468 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 TEX13BQ9BXU2 312 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 JMJD4Q9H9V9 463 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 FAM217BQ9NTX9 383 aaPredicted RBP23.29■■□□□ 1.32
SCN4B-206ENST00000532138 PNMA2Q9UL42 364 aa23.29■■□□□ 1.32
SCN4B-206ENST00000532138 CYTH3O43739 400 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 CDC27P30260 824 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 STAT3P40763 770 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 LACTBP83111 547 aaPredicted RBP23.28■■□□□ 1.32
SCN4B-206ENST00000532138 PLS1Q14651 629 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 KIF22Q14807 665 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 CDC37Q16543 378 aaPredicted RBP23.28■■□□□ 1.32
SCN4B-206ENST00000532138 NBPF11Q86T75 865 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 RIOX2Q8IUF8 465 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 CPXCR1Q8N123 301 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 SRBD1Q8N5C6 995 aaKnown RBP23.28■■□□□ 1.32
SCN4B-206ENST00000532138 SHCBP1Q8NEM2 672 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 MOV10L1Q9BXT6 1211 aaKnown RBP23.28■■□□□ 1.32
SCN4B-206ENST00000532138 RAVER2Q9HCJ3 691 aaKnown RBP23.28■■□□□ 1.32
SCN4B-206ENST00000532138 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 ZNF536O15090 1300 aa23.28■■□□□ 1.32
SCN4B-206ENST00000532138 ZSWIM8A7E2V4 1837 aa23.27■■□□□ 1.32
SCN4B-206ENST00000532138 SLC25A27O95847 323 aa23.27■■□□□ 1.32
SCN4B-206ENST00000532138 SNAP25P60880 206 aa23.27■■□□□ 1.32
SCN4B-206ENST00000532138 PKN2Q16513 984 aaKnown RBP23.27■■□□□ 1.32
SCN4B-206ENST00000532138 CCDC174Q6PII3 467 aa23.27■■□□□ 1.32
SCN4B-206ENST00000532138 NOL8Q76FK4 1167 aaKnown RBP23.27■■□□□ 1.32
SCN4B-206ENST00000532138 SLKQ9H2G2 1235 aaPredicted RBP23.27■■□□□ 1.32
SCN4B-206ENST00000532138 PFKFB2O60825 505 aa23.26■■□□□ 1.31
SCN4B-206ENST00000532138 ICAM1P05362 532 aa23.26■■□□□ 1.31
SCN4B-206ENST00000532138 MAPK4P31152 587 aa23.26■■□□□ 1.31
SCN4B-206ENST00000532138 CCT2P78371 535 aaKnown RBP23.26■■□□□ 1.31
SCN4B-206ENST00000532138 SNRNP48Q6IEG0 339 aaKnown RBP23.26■■□□□ 1.31
SCN4B-206ENST00000532138 PORCNQ9H237 461 aa23.26■■□□□ 1.31
SCN4B-206ENST00000532138 LIMCH1Q9UPQ0 1083 aa23.26■■□□□ 1.31
SCN4B-206ENST00000532138 PLXNB2O15031 1838 aa23.26■■□□□ 1.31
SCN4B-206ENST00000532138 ZBTB5O15062 677 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 ADD1P35611 737 aaKnown RBP23.25■■□□□ 1.31
SCN4B-206ENST00000532138 FCGRTP55899 365 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 STK3Q13188 491 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 QRICH1Q2TAL8 776 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 TKFCQ3LXA3 575 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 CCAR1Q8IX12 1150 aaKnown RBP23.25■■□□□ 1.31
SCN4B-206ENST00000532138 CMTR1Q8N1G2 835 aaKnown RBP23.25■■□□□ 1.31
SCN4B-206ENST00000532138 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 MROH8Q9H579 483 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 CCPG1Q9ULG6 757 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 CNTNAP5Q8WYK1 1306 aa23.25■■□□□ 1.31
SCN4B-206ENST00000532138 ZNFX1Q9P2E3 1918 aaKnown RBP23.24■■□□□ 1.31
SCN4B-206ENST00000532138 ERCC3P19447 782 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 MCM2P49736 904 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 FUT2Q10981 343 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 ARHGEF6Q15052 776 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 ME3Q16798 604 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 RRP36Q96EU6 259 aaKnown RBP23.24■■□□□ 1.31
SCN4B-206ENST00000532138 ZSCAN31Q96LW9 406 aaPredicted RBP23.24■■□□□ 1.31
SCN4B-206ENST00000532138 AGBL1Q96MI9 1066 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 PIGSQ96S52 555 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 EFCC1Q9HA90 598 aa23.24■■□□□ 1.31
SCN4B-206ENST00000532138 NCOA5Q9HCD5 579 aaKnown RBP23.24■■□□□ 1.31
SCN4B-206ENST00000532138 LARGE1O95461 756 aa23.23■■□□□ 1.31
SCN4B-206ENST00000532138 PSMC4P43686 418 aa23.23■■□□□ 1.31
SCN4B-206ENST00000532138 FXR1P51114 621 aaKnown RBP eCLIP23.23■■□□□ 1.31
SCN4B-206ENST00000532138 SCRN1Q12765 414 aa23.23■■□□□ 1.31
SCN4B-206ENST00000532138 CPLX2Q6PUV4 134 aaKnown RBP23.23■■□□□ 1.31
SCN4B-206ENST00000532138 NCAPG2Q86XI2 1143 aa23.23■■□□□ 1.31
SCN4B-206ENST00000532138 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
SCN4B-206ENST00000532138 ARHGAP39Q9C0H5 1083 aa23.23■■□□□ 1.31
SCN4B-206ENST00000532138 RIPK3Q9Y572 518 aa23.23■■□□□ 1.31
SCN4B-206ENST00000532138 ZNF236Q9UL36 1845 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 PNMA6FA0A0J9YX94 578 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 CPLX1O14810 134 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 IFNAR1P17181 557 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 CTGFP29279 349 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 TRAF1Q13077 416 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 NTRK3Q16288 839 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 GPR142Q7Z601 462 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 FBXO11Q86XK2 927 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 CCDC82Q8N4S0 544 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 CHST13Q8NET6 341 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 GTF3C6Q969F1 213 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 AMNQ9BXJ7 453 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 CWC22Q9HCG8 908 aaKnown RBP23.22■■□□□ 1.31
SCN4B-206ENST00000532138 SH2B1Q9NRF2 756 aaPredicted RBP23.22■■□□□ 1.31
SCN4B-206ENST00000532138 SEC63Q9UGP8 760 aaKnown RBP23.22■■□□□ 1.31
SCN4B-206ENST00000532138 FBXO40Q9UH90 709 aa23.22■■□□□ 1.31
SCN4B-206ENST00000532138 TNPO2O14787 897 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms