RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 COA7Q96BR5 231 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 HHIPL1Q96JK4 782 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 P2RX7Q99572 595 aaKnown RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 ASCC2Q9H1I8 757 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 RANBP17Q9H2T7 1088 aaKnown RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 HOXC10Q9NYD6 342 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 COL11A1P12107 1806 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 ZBED4O75132 1171 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 OSBPP22059 807 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 HTRA3P83110 453 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 PABPC4Q13310 644 aaKnown RBP eCLIP21.97■■□□□ 1.11
SMPD1-205ENST00000531303 PKP1Q13835 747 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 USH1GQ495M9 461 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 FBXO11Q86XK2 927 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 CPXCR1Q8N123 301 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 KCNJ14Q9UNX9 436 aa21.97■■□□□ 1.11
SMPD1-205ENST00000531303 MANSC4A6NHS7 340 aaPredicted RBP21.96■■□□□ 1.11
SMPD1-205ENST00000531303 PDHXO00330 501 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 VWA5AO00534 786 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 STX6O43752 255 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 DDIT3P35638 169 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 SHISA4Q96DD7 197 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 PTPN18Q99952 460 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 RAVER2Q9HCJ3 691 aaKnown RBP21.96■■□□□ 1.11
SMPD1-205ENST00000531303 SPDYE16A6NNV3 312 aaPredicted RBP21.96■■□□□ 1.11
SMPD1-205ENST00000531303 STXBP3O00186 592 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 XBP1P17861 261 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 NAPAP54920 295 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 KRT40Q6A162 431 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 FAM43AQ8N2R8 423 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 ZIC5Q96T25 663 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 AMNQ9BXJ7 453 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 SLC38A10Q9HBR0 1119 aa21.96■■□□□ 1.11
SMPD1-205ENST00000531303 PEX10O60683 326 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 CYP2C8P10632 490 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 TYW1BQ6NUM6 668 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 ANKRD23Q86SG2 305 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 CAPNS2Q96L46 248 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 AGBL1Q96MI9 1066 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 BARHL2Q9NY43 387 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 PCDHA1Q9Y5I3 950 aa21.95■■□□□ 1.1
SMPD1-205ENST00000531303 RASSF10A6NK89 507 aa21.94■■□□□ 1.1
SMPD1-205ENST00000531303 NLRP5P59047 1200 aa21.94■■□□□ 1.1
SMPD1-205ENST00000531303 PLS1Q14651 629 aa21.94■■□□□ 1.1
SMPD1-205ENST00000531303 MCTP1Q6DN14 999 aa21.94■■□□□ 1.1
SMPD1-205ENST00000531303 FBXO18Q8NFZ0 1043 aa21.94■■□□□ 1.1
SMPD1-205ENST00000531303 CCPG1Q9ULG6 757 aa21.94■■□□□ 1.1
SMPD1-205ENST00000531303 AOC2O75106 756 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 HERVK_113P62684 666 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 KIF23Q02241 960 aaPredicted RBP21.93■■□□□ 1.1
SMPD1-205ENST00000531303 PAGR1Q9BTK6 254 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 CHMP5Q9NZZ3 219 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 PNMA3Q9UL41 463 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 ADAMTS5Q9UNA0 930 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 MTMR6Q9Y217 621 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 ZNF536O15090 1300 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 MYPNQ86TC9 1320 aa21.93■■□□□ 1.1
SMPD1-205ENST00000531303 TESPA1A2RU30 521 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-205ENST00000531303 IGF2BP3O00425 579 aaKnown RBP eCLIP21.92■■□□□ 1.1
SMPD1-205ENST00000531303 TMEM132BQ14DG7 1078 aa21.92■■□□□ 1.1
SMPD1-205ENST00000531303 FERMT3Q86UX7 667 aa21.92■■□□□ 1.1
SMPD1-205ENST00000531303 SH3GLB2Q9NR46 395 aa21.92■■□□□ 1.1
SMPD1-205ENST00000531303 SMCO2A6NFE2 343 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 ICAM1P05362 532 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 FDX1P10109 184 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 POTEEQ6S8J3 1075 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 REPS2Q8NFH8 660 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 CCDC148Q8NFR7 591 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 SMCR8Q8TEV9 937 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-205ENST00000531303 HOMER2Q9NSB8 354 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 CIZ1Q9ULV3 898 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-205ENST00000531303 SLC45A1Q9Y2W3 748 aa21.91■■□□□ 1.1
SMPD1-205ENST00000531303 WDR33Q9C0J8 1336 aaKnown RBP21.91■■□□□ 1.1
SMPD1-205ENST00000531303 hCG_1984214I3L0E3 225 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 ALAS1P13196 640 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 NUCB2P80303 420 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 SREBF2Q12772 1141 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 SAFBQ15424 915 aaKnown RBP eCLIP21.9■■□□□ 1.1
SMPD1-205ENST00000531303 ZNF713Q8N859 430 aaPredicted RBP21.9■■□□□ 1.1
SMPD1-205ENST00000531303 CCDC12Q8WUD4 166 aaPredicted RBP21.9■■□□□ 1.1
SMPD1-205ENST00000531303 PHF20Q9BVI0 1012 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 BTBD7Q9P203 1132 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 ZDHHC9Q9Y397 364 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 ADAMTS3O15072 1205 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 MMP1P03956 469 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 ZSCAN22P10073 491 aaPredicted RBP21.9■■□□□ 1.1
SMPD1-205ENST00000531303 INHBEP58166 350 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 NOGQ13253 232 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 GNL2Q13823 731 aaKnown RBP21.9■■□□□ 1.1
SMPD1-205ENST00000531303 SNRNP48Q6IEG0 339 aaKnown RBP21.9■■□□□ 1.1
SMPD1-205ENST00000531303 LBX2Q6XYB7 198 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 IFNL1Q8IU54 200 aa21.9■■□□□ 1.1
SMPD1-205ENST00000531303 BRD1O95696 1058 aa21.89■■□□□ 1.09
SMPD1-205ENST00000531303 ADCY7P51828 1080 aa21.89■■□□□ 1.09
SMPD1-205ENST00000531303 DIS3L2Q8IYB7 885 aaKnown RBP21.89■■□□□ 1.09
SMPD1-205ENST00000531303 MB21D1Q8N884 522 aa21.89■■□□□ 1.09
SMPD1-205ENST00000531303 OXER1Q8TDS5 423 aa21.89■■□□□ 1.09
SMPD1-205ENST00000531303 PARK7Q99497 189 aaKnown RBP21.89■■□□□ 1.09
SMPD1-205ENST00000531303 C6orf50Q9HD87 102 aa21.89■■□□□ 1.09
SMPD1-205ENST00000531303 TXNRD2Q9NNW7 524 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms