RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 C1orf53Q5VUE5 145 aa26.32■■□□□ 1.8
TRAPPC4-210ENST00000531290 GPR153Q6NV75 609 aa26.32■■□□□ 1.8
TRAPPC4-210ENST00000531290 AGBL1Q96MI9 1066 aa26.32■■□□□ 1.8
TRAPPC4-210ENST00000531290 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.32■■□□□ 1.8
TRAPPC4-210ENST00000531290 POTEB2H3BUK9 544 aa26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 IGHDP01880 384 aa26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 CCDC96Q2M329 555 aa26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 ZNF589Q86UQ0 364 aaPredicted RBP26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 LENG1Q96BZ8 264 aaPredicted RBP26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 ABHD16BQ9H3Z7 469 aa26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 RNF146Q9NTX7 359 aa26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 LAMA3Q16787 3333 aa26.31■■□□□ 1.8
TRAPPC4-210ENST00000531290 ALAS1P13196 640 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 NOVP48745 357 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 NUCB1Q02818 461 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 CCDC174Q6PII3 467 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 EXOC6Q8TAG9 804 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 DCAF4Q8WV16 495 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 TRERF1Q96PN7 1200 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 TSEN34Q9BSV6 310 aaKnown RBP26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 PRR12Q9ULL5 1215 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 CCDC171Q6TFL3 1326 aa26.3■■□□□ 1.8
TRAPPC4-210ENST00000531290 ADAMTS4O75173 837 aa26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 DUSP11O75319 330 aaKnown RBP26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 TOP1P11387 765 aaKnown RBP26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 SDSP20132 328 aa26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 HAND2P61296 217 aa26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 TLE2Q04725 743 aa26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 PLEKHM2Q8IWE5 1019 aa26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 SPC25Q9HBM1 224 aa26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 ZNF536O15090 1300 aa26.29■■□□□ 1.8
TRAPPC4-210ENST00000531290 PARP14Q460N5 1801 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 A0A1W2PQ45 241 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 A0A1W2PQY0 241 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 SNAP25P60880 206 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 CNTN2Q02246 1040 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 MFSD6Q6ZSS7 791 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 ARMCX2Q7L311 632 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 CCDC144CPQ8IYA2 1237 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 NUP133Q8WUM0 1156 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 OSBPL3Q9H4L5 887 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 A1CFQ9NQ94 594 aaKnown RBP26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 TCP11L1Q9NUJ3 509 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 ZMYM6O95789 1325 aa26.28■■□□□ 1.8
TRAPPC4-210ENST00000531290 DNAH12Q6ZR08 3092 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 PCP11498 1178 aaKnown RBP26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 ACLYP53396 1101 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 CCDC144BQ3MJ40 725 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 DEFB123Q8N688 67 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 FAM133AQ8N9E0 248 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 FGD4Q96M96 766 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 TMEM47Q9BQJ4 181 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 PDLIM7Q9NR12 457 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 SYNRGQ9UMZ2 1314 aa26.27■■□□□ 1.8
TRAPPC4-210ENST00000531290 COL11A1P12107 1806 aaPredicted RBP26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 MOXD2PA6NHM9 499 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 KCNA10Q16322 511 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 AKNAD1Q5T1N1 836 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 RASGRP2Q7LDG7 609 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 KLHDC9Q8NEP7 349 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 BADQ92934 168 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 RNF41Q9H4P4 317 aaPredicted RBP26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 STARD7Q9NQZ5 370 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 CCPG1Q9ULG6 757 aa26.26■■□□□ 1.79
TRAPPC4-210ENST00000531290 ASB14A6NK59 587 aa26.25■■□□□ 1.79
TRAPPC4-210ENST00000531290 C6orf222P0C671 652 aaPredicted RBP26.25■■□□□ 1.79
TRAPPC4-210ENST00000531290 TTC14Q96N46 770 aa26.25■■□□□ 1.79
TRAPPC4-210ENST00000531290 DIAPH3Q9NSV4 1193 aa26.25■■□□□ 1.79
TRAPPC4-210ENST00000531290 TRIM43BA6NCK2 446 aa26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 ZNF213O14771 459 aa26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 PQBP1O60828 265 aaKnown RBP26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 CLTBP09497 229 aa26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 SLC16A2P36021 539 aa26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 TTBK2Q6IQ55 1244 aa26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 CWC27Q6UX04 472 aaKnown RBP26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 SH3RF1Q7Z6J0 888 aa26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 PCSK9Q8NBP7 692 aaKnown RBP26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 TRIM43Q96BQ3 446 aaPredicted RBP26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 GPCPD1Q9NPB8 672 aa26.24■■□□□ 1.79
TRAPPC4-210ENST00000531290 FRMPD3Q5JV73 1810 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 SOWAHBA6NEL2 793 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 HIP1O00291 1037 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 ICAM1P05362 532 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 SYDE2Q5VT97 1194 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 BTNL9Q6UXG8 535 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 NOL8Q76FK4 1167 aaKnown RBP26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 VTI1AQ96AJ9 217 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 GLT1D1Q96MS3 346 aa26.23■■□□□ 1.79
TRAPPC4-210ENST00000531290 FRMPD2Q68DX3 1309 aaPredicted RBP26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 DCDC2CA8MYV0 355 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 GJA9P57773 515 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 MUM1L1Q5H9M0 696 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 GNASQ5JWF2 1037 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 CCSAPQ6IQ19 270 aaPredicted RBP26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 NSMFQ6X4W1 530 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 Q7L0L9 218 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 ESR2Q92731 530 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 RANBP17Q9H2T7 1088 aaKnown RBP26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 TMEM39AQ9NV64 488 aa26.22■■□□□ 1.79
TRAPPC4-210ENST00000531290 CYP39A1Q9NYL5 469 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms