RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CASQ1P31415 396 aa19.4■□□□□ 0.7
BRCA2-204ENST00000530893 STIM1Q13586 685 aa19.4■□□□□ 0.7
BRCA2-204ENST00000530893 SOGA3Q5TF21 947 aa19.4■□□□□ 0.7
BRCA2-204ENST00000530893 SEPT12Q8IYM1 358 aa19.4■□□□□ 0.7
BRCA2-204ENST00000530893 ADSSL1Q8N142 457 aa19.4■□□□□ 0.7
BRCA2-204ENST00000530893 CEP95Q96GE4 821 aa19.4■□□□□ 0.7
BRCA2-204ENST00000530893 DDX41Q9UJV9 622 aaKnown RBP19.4■□□□□ 0.7
BRCA2-204ENST00000530893 PARP3Q9Y6F1 533 aa19.4■□□□□ 0.7
BRCA2-204ENST00000530893 SMCO2A6NFE2 343 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 N4BP3O15049 544 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 RHOBTB3O94955 611 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 OR52Z1P0C646 297 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 GOLGA8HP0CJ92 632 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 PRCPP42785 496 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 KMT5BQ4FZB7 885 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 MEX3CQ5U5Q3 659 aaKnown RBP19.39■□□□□ 0.69
BRCA2-204ENST00000530893 TRPC5Q9UL62 973 aaPredicted RBP19.39■□□□□ 0.69
BRCA2-204ENST00000530893 URI1O94763 535 aaPredicted RBP19.39■□□□□ 0.69
BRCA2-204ENST00000530893 CDC25AP30304 524 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 COPB1P53618 953 aaKnown RBP19.39■□□□□ 0.69
BRCA2-204ENST00000530893 GNG11P61952 73 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 NEK8Q86SG6 692 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 SP8Q8IXZ3 490 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 RIOX1Q9H6W3 641 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.39■□□□□ 0.69
BRCA2-204ENST00000530893 V9GYY5 206 aaPredicted RBP19.39■□□□□ 0.69
BRCA2-204ENST00000530893 C10orf71Q711Q0 1435 aa19.39■□□□□ 0.69
BRCA2-204ENST00000530893 EFCAB8A8MWE9 144 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 KCNJ18B7U540 433 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 GYPCP04921 128 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 PPP1R2P41236 205 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 CBX1P83916 185 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 KCNJ12Q14500 433 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 GIMAP8Q8ND71 665 aaPredicted RBP19.38■□□□□ 0.69
BRCA2-204ENST00000530893 MNS1Q8NEH6 495 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 COA1Q9GZY4 146 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 MTMR7Q9Y216 660 aa19.38■□□□□ 0.69
BRCA2-204ENST00000530893 C6orf229H3BNL8 230 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 POLRMTO00411 1230 aaKnown RBP19.37■□□□□ 0.69
BRCA2-204ENST00000530893 EEF1GP26641 437 aaKnown RBP19.37■□□□□ 0.69
BRCA2-204ENST00000530893 CASP14P31944 242 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 MAP3K9P80192 1104 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 ERCC6LQ2NKX8 1250 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 ASPRV1Q53RT3 343 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 FBXO38Q6PIJ6 1188 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 RASGRP2Q7LDG7 609 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 TMTC1Q8IUR5 882 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 NOC3LQ8WTT2 800 aaKnown RBP19.37■□□□□ 0.69
BRCA2-204ENST00000530893 CCDC47Q96A33 483 aaKnown RBP19.37■□□□□ 0.69
BRCA2-204ENST00000530893 ADGRG1Q9Y653 693 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 AFF2P51816 1311 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 MYO3BQ8WXR4 1341 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 QSER1Q2KHR3 1735 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 PSMA7O14818 248 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 FANCGO15287 622 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 KLRC4O43908 158 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 H2AFXP16104 143 aaPredicted RBP19.37■□□□□ 0.69
BRCA2-204ENST00000530893 UBXN4Q92575 508 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 THAP9Q9H5L6 903 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 GDAQ9Y2T3 454 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 DAGLAQ9Y4D2 1042 aa19.37■□□□□ 0.69
BRCA2-204ENST00000530893 SOWAHDA6NJG2 315 aa19.36■□□□□ 0.69
BRCA2-204ENST00000530893 CCNT1O60563 726 aaKnown RBP19.36■□□□□ 0.69
BRCA2-204ENST00000530893 CCT6AP40227 531 aaKnown RBP19.36■□□□□ 0.69
BRCA2-204ENST00000530893 GABPAQ06546 454 aa19.36■□□□□ 0.69
BRCA2-204ENST00000530893 CABP7Q86V35 215 aa19.36■□□□□ 0.69
BRCA2-204ENST00000530893 REXO1Q8N1G1 1221 aaKnown RBP19.36■□□□□ 0.69
BRCA2-204ENST00000530893 MTMR4Q9NYA4 1195 aa19.36■□□□□ 0.69
BRCA2-204ENST00000530893 PPEF1O14829 653 aaPredicted RBP19.35■□□□□ 0.69
BRCA2-204ENST00000530893 PDHBP11177 359 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 AMPD3Q01432 767 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 DDR1Q08345 913 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 LETM2Q2VYF4 491 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 DHTKD1Q96HY7 919 aaPredicted RBP19.35■□□□□ 0.69
BRCA2-204ENST00000530893 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 A0A1W2PQC6 194 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 PP2D1A8MPX8 630 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 TADA3O75528 432 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 SNHG28P0DPA3 235 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 FXR1P51114 621 aaKnown RBP eCLIP19.35■□□□□ 0.69
BRCA2-204ENST00000530893 RAD9BQ6WBX8 426 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 CPLX3Q8WVH0 158 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 KIFC2Q96AC6 838 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 WDR24Q96S15 920 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 PIGSQ96S52 555 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 VPS16Q9H269 839 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 ABHD10Q9NUJ1 306 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 TTF2Q9UNY4 1162 aaKnown RBP19.35■□□□□ 0.69
BRCA2-204ENST00000530893 ATP6V0A2Q9Y487 856 aa19.35■□□□□ 0.69
BRCA2-204ENST00000530893 SPDYE4A6NLX3 237 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 GTF2IP78347 998 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 C7orf25Q9BPX7 421 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 DESI2Q9BSY9 194 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 ARGLU1Q9NWB6 273 aaPredicted RBP19.34■□□□□ 0.69
BRCA2-204ENST00000530893 MRFAP1Q9Y605 127 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 MYH8P13535 1937 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 IGKV6D-41A0A0C4DH26 115 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 MTF1Q14872 753 aa19.34■□□□□ 0.69
BRCA2-204ENST00000530893 TXNRD1Q16881 649 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms