RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 PRCCQ92733 491 aaPredicted RBP15.69■□□□□ 0.1
PCF11-204ENST00000530660 RBM12Q9NTZ6 932 aaKnown RBP15.69■□□□□ 0.1
PCF11-204ENST00000530660 PLAAQ9Y263 795 aa15.69■□□□□ 0.1
PCF11-204ENST00000530660 A6NHS1 94 aa15.69■□□□□ 0.1
PCF11-204ENST00000530660 HMGB1P1B2RPK0 211 aaPredicted RBP15.69■□□□□ 0.1
PCF11-204ENST00000530660 PES1O00541 588 aaKnown RBP15.69■□□□□ 0.1
PCF11-204ENST00000530660 ACTN4O43707 911 aaKnown RBP15.69■□□□□ 0.1
PCF11-204ENST00000530660 MAP3K12Q12852 859 aa15.69■□□□□ 0.1
PCF11-204ENST00000530660 C1QTNF12Q5T7M4 302 aa15.69■□□□□ 0.1
PCF11-204ENST00000530660 CPLX4Q7Z7G2 160 aa15.69■□□□□ 0.1
PCF11-204ENST00000530660 EPB41L5Q9HCM4 733 aa15.69■□□□□ 0.1
PCF11-204ENST00000530660 DPPA5A6NC42 116 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 B4DLN1 442 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 LGR5O75473 907 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 COPB1P53618 953 aaKnown RBP15.68■□□□□ 0.1
PCF11-204ENST00000530660 UBXN1Q04323 297 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 KCTD19Q17RG1 926 aaPredicted RBP15.68■□□□□ 0.1
PCF11-204ENST00000530660 GKAP1Q5VSY0 366 aaPredicted RBP15.68■□□□□ 0.1
PCF11-204ENST00000530660 MFN1Q8IWA4 741 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 RAPGEF5Q92565 580 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 STAMQ92783 540 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 OSBPL1AQ9BXW6 950 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 NDST4Q9H3R1 872 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 ZFATQ9P243 1243 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 SLC12A6Q9UHW9 1150 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 CAPN6Q9Y6Q1 641 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 GUCY2DQ02846 1103 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 CHCHD3Q9NX63 227 aaKnown RBP15.68■□□□□ 0.1
PCF11-204ENST00000530660 ANKARQ7Z5J8 1434 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 UTYO14607 1347 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 ANO9A1A5B4 782 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 PRC1O43663 620 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 SPATA21Q7Z572 469 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 HAUS7Q99871 368 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 ARHGEF10LQ9HCE6 1279 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 RGL1Q9NZL6 768 aa15.68■□□□□ 0.1
PCF11-204ENST00000530660 CNOT8Q9UFF9 292 aaKnown RBP15.68■□□□□ 0.1
PCF11-204ENST00000530660 PPP1R3GB7ZBB8 358 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 ROR2Q01974 943 aaKnown RBP15.67■□□□□ 0.1
PCF11-204ENST00000530660 ODF2Q5BJF6 829 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
PCF11-204ENST00000530660 RBM33Q96EV2 1170 aaKnown RBP15.67■□□□□ 0.1
PCF11-204ENST00000530660 KDM4CQ9H3R0 1056 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 TULP1O00294 542 aaPredicted RBP15.67■□□□□ 0.1
PCF11-204ENST00000530660 NCK2O43639 380 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 ZPR1O75312 459 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 TRIM37O94972 964 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 ECEL1O95672 775 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 FERP16591 822 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 TTF1Q15361 905 aaPredicted RBP15.67■□□□□ 0.1
PCF11-204ENST00000530660 TRIM68Q6AZZ1 485 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 SPATA20Q8TB22 786 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 MS4A14Q96JA4 679 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 PTPRUQ92729 1446 aa15.67■□□□□ 0.1
PCF11-204ENST00000530660 SPDYE5A6NIY4 337 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 PAK2Q13177 524 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 HHATQ5VTY9 493 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 KRT26Q7Z3Y9 468 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 RIC3Q7Z5B4 369 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 ERICH1Q86X53 443 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 KBTBD3Q8NAB2 608 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 TBC1D5Q92609 795 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 ALS2CR12Q96Q35 445 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 LUC7L2Q9Y383 392 aaKnown RBP15.66■□□□□ 0.1
PCF11-204ENST00000530660 A8MUI8 341 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 F8W031 263 aaPredicted RBP15.66■□□□□ 0.1
PCF11-204ENST00000530660 EVI5O60447 810 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 KCNJ2P63252 427 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 KRT83P78385 493 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 CDC37Q16543 378 aaPredicted RBP15.66■□□□□ 0.1
PCF11-204ENST00000530660 PPP1R15BQ5SWA1 713 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 TMBIM4Q9HC24 238 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 FBXO2Q9UK22 296 aaPredicted RBP15.66■□□□□ 0.1
PCF11-204ENST00000530660 CCT8L1PA6NM43 557 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 DCDC2CA8MYV0 355 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 RNF8O76064 485 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 TUBP50607 506 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 CD302Q8IX05 232 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 RFX7Q2KHR2 1363 aa15.66■□□□□ 0.1
PCF11-204ENST00000530660 A0A087X0B3 334 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 SRRM3A6NNA2 597 aaPredicted RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 HEXIM1O94992 359 aaKnown RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 ZNF530Q6P9A1 599 aaPredicted RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 ELOA2Q8IYF1 753 aaPredicted RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 FNBP4Q8N3X1 1017 aaPredicted RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 DSCC1Q9BVC3 393 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 TMX4Q9H1E5 349 aaPredicted RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 SH3TC1Q8TE82 1336 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 C5orf60A6NFR6 353 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 GOLGA6L10A6NI86 522 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 GHRP10912 638 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 TOB1P50616 345 aaPredicted RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 PTPN12Q05209 780 aaKnown RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 ANKRD20A2Q5SQ80 823 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 ANKRD20A1Q5TYW2 823 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 ANKRD20A3Q5VUR7 823 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms