RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 ADD2P35612 726 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 RABGGTBP53611 331 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 BEX3Q00994 111 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 ARMCX2Q7L311 632 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 OTOP2Q7RTS6 562 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 RHPN1Q8TCX5 695 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 LRFN3Q9BTN0 628 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 NOC4LQ9BVI4 516 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 WNT8AQ9H1J5 351 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 EPHX3Q9H6B9 360 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 GNEQ9Y223 722 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 PRRC2BQ5JSZ5 2229 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-210ENST00000530563 MYH8P13535 1937 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 F5H6K3 240 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 ERC2O15083 957 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 TLR3O15455 904 aaKnown RBP12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 PTGS1P23219 599 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 KLRC3Q07444 240 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 ERC1Q8IUD2 1116 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 DNAJC2Q99543 621 aaKnown RBP12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 TRPV6Q9H1D0 765 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 PCDHA11Q9Y5I1 949 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 MTCH2Q9Y6C9 303 aa12.84□□□□□ -0.35
TM9SF1-210ENST00000530563 MCM3APO60318 1980 aa12.83□□□□□ -0.35
TM9SF1-210ENST00000530563 RFXAPO00287 272 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 TLL1O43897 1013 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 NDUFB10O96000 172 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 RASA1P20936 1047 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 CCL23P55773 120 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 ITGA7Q13683 1181 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 AGBL1Q96MI9 1066 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 SPC25Q9HBM1 224 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 RAVER2Q9HCJ3 691 aaKnown RBP12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 NYAP2Q9P242 653 aa12.83□□□□□ -0.36
TM9SF1-210ENST00000530563 IGKV6D-41A0A0C4DH26 115 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 EPOPA6NHQ4 379 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 APBB1O00213 710 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 TMEM63BQ5T3F8 832 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 CPXCR1Q8N123 301 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 ANKRD35Q8N283 1001 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 IL27Q8NEV9 243 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 MTIF3Q9H2K0 278 aaKnown RBP12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 C11orf16Q9NQ32 467 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 PAG1Q9NWQ8 432 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 SLC4A7Q9Y6M7 1214 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 MUC6Q6W4X9 2439 aa12.82□□□□□ -0.36
TM9SF1-210ENST00000530563 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 RAD21O60216 631 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 B4GALT4O60513 344 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 ZBED4O75132 1171 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 CABYRO75952 493 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 TNFAIP2Q03169 654 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 TTLL4Q14679 1199 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 UBE3CQ15386 1083 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 PPP2R2DQ66LE6 453 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 CHST13Q8NET6 341 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 MKL1Q969V6 931 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 SCLYQ96I15 445 aa12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 PUS7LQ9H0K6 701 aaKnown RBP12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
TM9SF1-210ENST00000530563 ARHGEF15O94989 841 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 ATP2A2P16615 1042 aaKnown RBP12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 SMPD1P17405 629 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 ATP5JP18859 108 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 AAK1Q2M2I8 961 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 SBK1Q52WX2 424 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 KRT40Q6A162 431 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 TAPT1Q6NXT6 567 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 SIRT2Q8IXJ6 389 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 MICALL1Q8N3F8 863 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 SEZ6LQ9BYH1 1024 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 PDGFCQ9NRA1 345 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 FBXO40Q9UH90 709 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 SLC4A4Q9Y6R1 1079 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 ZNF536O15090 1300 aa12.8□□□□□ -0.36
TM9SF1-210ENST00000530563 CA3P07451 260 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 OAZ1P54368 228 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 PSMC6P62333 389 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 HSP90AB4PQ58FF6 505 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 TLK2Q86UE8 772 aa12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 RPUSD2Q8IZ73 545 aaKnown RBP12.79□□□□□ -0.36
TM9SF1-210ENST00000530563 CLASRPQ8N2M8 674 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms