RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 ZNF341Q9BYN7 854 aa11.22□□□□□ -0.61
NCAPD3-208ENST00000530396 ARMT1Q9H993 441 aa11.22□□□□□ -0.61
NCAPD3-208ENST00000530396 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
NCAPD3-208ENST00000530396 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
NCAPD3-208ENST00000530396 CEP290O15078 2479 aa11.22□□□□□ -0.61
NCAPD3-208ENST00000530396 MMP1P03956 469 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 TDO2P48775 406 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 LRMPQ12912 555 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 SLC4A8Q2Y0W8 1093 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 DPCR1Q3MIW9 517 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 CT47A1Q5JQC4 288 aaPredicted RBP11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 SHC4Q6S5L8 630 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 FAM13BQ9NYF5 915 aa11.21□□□□□ -0.61
NCAPD3-208ENST00000530396 MROH7-TTC4A0A0A0MT08 1334 aa11.21□□□□□ -0.62
NCAPD3-208ENST00000530396 CBFA2T2O43439 604 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 NRDCO43847 1150 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 BMP15O95972 392 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 PTPREP23469 700 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 NCAPHQ15003 741 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 NKX2-3Q8TAU0 364 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 FAM151AQ8WW52 585 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 ESR2Q92731 530 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 RNF26Q9BY78 433 aaPredicted RBP11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 ARHGAP39Q9C0H5 1083 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 LRP2BPQ9P2M1 347 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 DENND2AQ9ULE3 1009 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 CEP131Q9UPN4 1083 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 TACC3Q9Y6A5 838 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 ZSWIM8A7E2V4 1837 aa11.2□□□□□ -0.62
NCAPD3-208ENST00000530396 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 CALM1P0DP23 149 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 CALM2P0DP24 149 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 CALM3P0DP25 149 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 SKILP12757 684 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 CYP7A1P22680 504 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 INPP5BP32019 993 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 CCZ1BP86790 482 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 CCZ1P86791 482 aaPredicted RBP11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 PPARAQ07869 468 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 SEC23AQ15436 765 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 KANK3Q6NY19 840 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 C17orf99Q6UX52 265 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 KRBA2Q6ZNG9 492 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 NYAP1Q6ZVC0 841 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 TRIML1Q8N9V2 468 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 FANCBQ8NB91 859 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 PHKBQ93100 1093 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 AIFM3Q96NN9 605 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 GJB4Q9NTQ9 266 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 ZNF112Q9UJU3 913 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 TNNT1P13805 278 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 XBP1P17861 261 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 RBM10P98175 930 aaKnown RBP11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 MYL5Q02045 173 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 NT5DC1Q5TFE4 455 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 SH3TC2Q8TF17 1288 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 ANKRD7Q92527 254 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 RIOK1Q9BRS2 568 aaKnown RBP11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 UBAC1Q9BSL1 405 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 KCNH3Q9ULD8 1083 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 KCNH4Q9UQ05 1017 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
NCAPD3-208ENST00000530396 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 CCP110O43303 1012 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 PRKAB2O43741 272 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 ORC4O43929 436 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 MARCKSP29966 332 aaPredicted RBP11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 TPD52L1Q16890 204 aaPredicted RBP11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 NOL9Q5SY16 702 aaKnown RBP11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 CDC42EP5Q6NZY7 148 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 DIS3L2Q8IYB7 885 aaKnown RBP11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 CCAR2Q8N163 923 aaKnown RBP11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 CCDC112Q8NEF3 446 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 CCDC34Q96HJ3 373 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 SRRDQ9UH36 339 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 DACH1Q9UI36 760 aa11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 FBXO2Q9UK22 296 aaPredicted RBP11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 SRPRBQ9Y5M8 271 aaKnown RBP11.18□□□□□ -0.62
NCAPD3-208ENST00000530396 ADGRA2Q96PE1 1338 aa11.17□□□□□ -0.62
NCAPD3-208ENST00000530396 PDHXO00330 501 aa11.17□□□□□ -0.62
NCAPD3-208ENST00000530396 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
NCAPD3-208ENST00000530396 DDAH1O94760 285 aa11.17□□□□□ -0.62
NCAPD3-208ENST00000530396 MYCP01106 439 aaPredicted RBP11.17□□□□□ -0.62
NCAPD3-208ENST00000530396 HOXD10P28358 340 aa11.17□□□□□ -0.62
NCAPD3-208ENST00000530396 PSMC4P43686 418 aa11.17□□□□□ -0.62
NCAPD3-208ENST00000530396 TOB1P50616 345 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms