RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 CDC37Q16543 378 aaPredicted RBP15.79■□□□□ 0.12
SMCO4-205ENST00000529714 REPS2Q8NFH8 660 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 PIGSQ96S52 555 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 SLC26A6Q9BXS9 759 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 VAT1LQ9HCJ6 419 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 RABGAP1Q9Y3P9 1069 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 CTDP1Q9Y5B0 961 aaPredicted RBP15.79■□□□□ 0.12
SMCO4-205ENST00000529714 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
SMCO4-205ENST00000529714 BAZ2BQ9UIF8 2168 aaKnown RBP15.79■□□□□ 0.12
SMCO4-205ENST00000529714 ADGRA2Q96PE1 1338 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 hCG_1984214I3L0E3 225 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 CA12O43570 354 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 ICAM1P05362 532 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 CYP2C8P10632 490 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 PFKFB3Q16875 520 aaPredicted RBP15.78■□□□□ 0.12
SMCO4-205ENST00000529714 QRICH1Q2TAL8 776 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
SMCO4-205ENST00000529714 ZNF713Q8N859 430 aaPredicted RBP15.78■□□□□ 0.12
SMCO4-205ENST00000529714 WASF1Q92558 559 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 ZFYVE28Q9HCC9 887 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 MORF4L1Q9UBU8 362 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 ZNF214Q9UL59 606 aaPredicted RBP15.78■□□□□ 0.12
SMCO4-205ENST00000529714 KIF3AQ9Y496 699 aa15.78■□□□□ 0.12
SMCO4-205ENST00000529714 ZNF536O15090 1300 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 JAK2O60674 1132 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 SCG2P13521 617 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 FDPSP14324 419 aaKnown RBP15.77■□□□□ 0.12
SMCO4-205ENST00000529714 POTEEQ6S8J3 1075 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
SMCO4-205ENST00000529714 HOMER1Q86YM7 354 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 AMNQ9BXJ7 453 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 TEX13BQ9BXU2 312 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 ORC3Q9UBD5 711 aaPredicted RBP15.77■□□□□ 0.12
SMCO4-205ENST00000529714 RBPJLQ9UBG7 517 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 SMC3Q9UQE7 1217 aa15.77■□□□□ 0.12
SMCO4-205ENST00000529714 TLR2O60603 784 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 HSP90AA1P07900 732 aaKnown RBP15.76■□□□□ 0.11
SMCO4-205ENST00000529714 COPB2P35606 906 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 TMEM132BQ14DG7 1078 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 PKN1Q16512 942 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 FAM110CQ1W6H9 321 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 PPP1R18Q6NYC8 613 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 FBXO11Q86XK2 927 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 TEX2Q8IWB9 1127 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 DNAJC5GQ8N7S2 189 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 BTBD7Q9P203 1132 aa15.76■□□□□ 0.11
SMCO4-205ENST00000529714 PPP1R11O60927 126 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-205ENST00000529714 CNMDO75829 334 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 BCRP11274 1271 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 STAT3P40763 770 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 ERVK-9P63128 1117 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 ERVK-24P63145 666 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
SMCO4-205ENST00000529714 CRHR2Q13324 411 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 TKFCQ3LXA3 575 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 CCDC174Q6PII3 467 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 RIOX2Q8IUF8 465 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 RGS22Q8NE09 1264 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 GPRC5AQ8NFJ5 357 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 DDX11Q96FC9 970 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 MAF1Q9H063 256 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 SPATC1LQ9H0A9 340 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 SH3GLB2Q9NR46 395 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 SAGE1Q9NXZ1 904 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 BARHL2Q9NY43 387 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
SMCO4-205ENST00000529714 ABCB11O95342 1321 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 SLC25A27O95847 323 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 GJB2P29033 226 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 SNAP25P60880 206 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 CCNA1P78396 465 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 WWC2Q6AWC2 1192 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 SNRNP48Q6IEG0 339 aaKnown RBP15.74■□□□□ 0.11
SMCO4-205ENST00000529714 C17orf99Q6UX52 265 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 HEATR3Q7Z4Q2 680 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 CPXCR1Q8N123 301 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 FAM184AQ8NB25 1140 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 SHCBP1Q8NEM2 672 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 CCDC12Q8WUD4 166 aaPredicted RBP15.74■□□□□ 0.11
SMCO4-205ENST00000529714 PIBF1Q8WXW3 757 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 PAGR1Q9BTK6 254 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 RAVER2Q9HCJ3 691 aaKnown RBP15.74■□□□□ 0.11
SMCO4-205ENST00000529714 TXNRD2Q9NNW7 524 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 RNF186Q9NXI6 227 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 PCDHA1Q9Y5I3 950 aa15.74■□□□□ 0.11
SMCO4-205ENST00000529714 STXBP3O00186 592 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 XBP1P17861 261 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 PLS1Q14651 629 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 ANKRD13CQ8N6S4 541 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 CCDC148Q8NFR7 591 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 AGBL1Q96MI9 1066 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 ALG1Q9BT22 464 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 FBXO40Q9UH90 709 aa15.73■□□□□ 0.11
SMCO4-205ENST00000529714 MRPL11Q9Y3B7 192 aaKnown RBP15.73■□□□□ 0.11
SMCO4-205ENST00000529714 RBBP6Q7Z6E9 1792 aaKnown RBP15.72■□□□□ 0.11
SMCO4-205ENST00000529714 ESYT2A0FGR8 921 aa15.72■□□□□ 0.11
SMCO4-205ENST00000529714 PDCP20941 246 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms