RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 TBX21Q9UL17 535 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 EXOC6BQ9Y2D4 811 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 EYSQ5T1H1 3165 aa10.82□□□□□ -0.68
VPS11-203ENST00000529545 PRUNE2Q8WUY3 3088 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 A0A0U1RQG5 324 aaPredicted RBP10.81□□□□□ -0.68
VPS11-203ENST00000529545 IFIT2P09913 472 aaKnown RBP10.81□□□□□ -0.68
VPS11-203ENST00000529545 PBX2P40425 430 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 EMP3P54852 163 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 TMEM240Q5SV17 173 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 FAM83BQ5T0W9 1011 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 SNRNP48Q6IEG0 339 aaKnown RBP10.81□□□□□ -0.68
VPS11-203ENST00000529545 CLASRPQ8N2M8 674 aaKnown RBP10.81□□□□□ -0.68
VPS11-203ENST00000529545 ADAMTS19Q8TE59 1207 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS11-203ENST00000529545 UHRF1Q96T88 793 aaPredicted RBP10.81□□□□□ -0.68
VPS11-203ENST00000529545 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS11-203ENST00000529545 SLC28A3Q9HAS3 691 aa10.81□□□□□ -0.68
VPS11-203ENST00000529545 ZNF214Q9UL59 606 aaPredicted RBP10.81□□□□□ -0.68
VPS11-203ENST00000529545 TCRBV5S4A2TA0A5A2 114 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 GRXCR1A8MXD5 290 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 USP17L21D6R901 530 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 ARVCFO00192 962 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 ZBED4O75132 1171 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 MBD4O95243 580 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 SNAI1O95863 264 aaPredicted RBP10.8□□□□□ -0.68
VPS11-203ENST00000529545 ASGR1P07306 291 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 CSF2RAP15509 400 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 CST5P28325 142 aaPredicted RBP10.8□□□□□ -0.68
VPS11-203ENST00000529545 ACVR2BQ13705 512 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 CCDC85BQ15834 202 aaPredicted RBP10.8□□□□□ -0.68
VPS11-203ENST00000529545 GNASQ5JWF2 1037 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 C12orf60Q5U649 245 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 MAMDC4Q6UXC1 1216 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 ZNF365Q70YC5 407 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 SLF1Q9BQI6 1058 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 PPP1R12CQ9BZL4 782 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 ABHD16BQ9H3Z7 469 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 IL1RAPL2Q9NP60 686 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 VCANP13611 3396 aa10.8□□□□□ -0.68
VPS11-203ENST00000529545 BAZ2AQ9UIF9 1905 aaKnown RBP10.8□□□□□ -0.68
VPS11-203ENST00000529545 PRKAB2O43741 272 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 FGBP02675 491 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 ACRP10323 421 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
VPS11-203ENST00000529545 CDK7P50613 346 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 CCSAPQ6IQ19 270 aaPredicted RBP10.79□□□□□ -0.68
VPS11-203ENST00000529545 CEP85Q6P2H3 762 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 C16orf86Q6ZW13 317 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 C16orf59Q7L2K0 433 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 ANKRD35Q8N283 1001 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 PRPF38AQ8NAV1 312 aaKnown RBP10.79□□□□□ -0.68
VPS11-203ENST00000529545 REPS2Q8NFH8 660 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 RHPN1Q8TCX5 695 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 FAM122AQ96E09 287 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 BCL11AQ9H165 835 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 IL23AQ9NPF7 189 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
VPS11-203ENST00000529545 FBXO40Q9UH90 709 aa10.79□□□□□ -0.68
VPS11-203ENST00000529545 MYO9BQ13459 2157 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 CYP2D7A0A087X1C5 515 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 MYADML2A6NDP7 307 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 ADD2P35612 726 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 GJA9P57773 515 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 AAK1Q2M2I8 961 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 CCDC144BQ3MJ40 725 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
VPS11-203ENST00000529545 CPXCR1Q8N123 301 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 TMC2Q8TDI7 906 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 HERVK_113Q902F9 699 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 KIF1BPQ96EK5 621 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 C1QTNF1Q9BXJ1 281 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 UPF3AQ9H1J1 476 aaKnown RBP10.78□□□□□ -0.68
VPS11-203ENST00000529545 PAG1Q9NWQ8 432 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 SLC4A4Q9Y6R1 1079 aa10.78□□□□□ -0.68
VPS11-203ENST00000529545 SPTBN5Q9NRC6 3674 aaKnown RBP10.77□□□□□ -0.68
VPS11-203ENST00000529545 DNAJC25-GNG10A0A024R161 153 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 F5H6K3 240 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 ATP2A1O14983 1001 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 PPP1R37O75864 691 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 CABYRO75952 493 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 CYP2C18P33260 490 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 PLA2G5P39877 138 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 KLRC3Q07444 240 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 ADGRE1Q14246 886 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 FAM126BQ8IXS8 530 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 RPUSD2Q8IZ73 545 aaKnown RBP10.77□□□□□ -0.69
VPS11-203ENST00000529545 NUP88Q99567 741 aaPredicted RBP10.77□□□□□ -0.69
VPS11-203ENST00000529545 SEZ6LQ9BYH1 1024 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 HIPK3Q9H422 1215 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 RAPGEFL1Q9UHV5 662 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 RIPK3Q9Y572 518 aa10.77□□□□□ -0.69
VPS11-203ENST00000529545 ZEB2O60315 1214 aa10.76□□□□□ -0.69
VPS11-203ENST00000529545 HMMRO75330 724 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms