RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SLC4A3P48751 1232 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 TCP10Q12799 353 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 MFSD14CQ5VZR4 134 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 KRT40Q6A162 431 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 PSRC1Q6PGN9 363 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-212ENST00000528930 SLC44A5Q8NCS7 719 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 TRPV1Q8NER1 839 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 ASCC2Q9H1I8 757 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-212ENST00000528930 DDX4Q9NQI0 724 aaKnown RBP10.29□□□□□ -0.76
SSBP3-212ENST00000528930 PIH1D3Q9NQM4 214 aaKnown RBP10.29□□□□□ -0.76
SSBP3-212ENST00000528930 LRP2BPQ9P2M1 347 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 FAM208BQ5VWN6 2430 aa10.29□□□□□ -0.76
SSBP3-212ENST00000528930 DNAH14Q0VDD8 3507 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 APBB1O00213 710 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 ENTPD3O75355 529 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 TIMP1P01033 207 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 LDHCP07864 332 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 CYBAP13498 195 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 RGS3P49796 1198 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 GSTO1P78417 241 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 FAAP100Q0VG06 881 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 PKDCCQ504Y2 493 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 MFSD5Q6N075 450 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 SH3BP5LQ7L8J4 393 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 ASCL5Q7RTU5 278 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 BMP8AQ7Z5Y6 402 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 ADGRA1Q86SQ6 560 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 CLASRPQ8N2M8 674 aaKnown RBP10.28□□□□□ -0.76
SSBP3-212ENST00000528930 ANTXR1Q9H6X2 564 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 TXNRD2Q9NNW7 524 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 TMEM39AQ9NV64 488 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 TBX21Q9UL17 535 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 USP24Q9UPU5 2620 aa10.28□□□□□ -0.76
SSBP3-212ENST00000528930 DDTLA6NHG4 134 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-212ENST00000528930 RFXAPO00287 272 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 IGSF3O75054 1194 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 MAP4K4O95819 1239 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-212ENST00000528930 S1PR4O95977 384 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 IL9P15248 144 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 CNGA1P29973 690 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 MLLT3P42568 568 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-212ENST00000528930 MAP3K10Q02779 954 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 LEXMQ3ZCV2 418 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-212ENST00000528930 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 ZNF365Q70YC5 407 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 ANKRD33Q7Z3H0 272 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 FERMT2Q96AC1 680 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 DCTPP1Q9H773 170 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 PTPRSQ13332 1948 aa10.27□□□□□ -0.77
SSBP3-212ENST00000528930 PRR23AA6NEV1 266 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 EPOPA6NHQ4 379 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 SMARCA5O60264 1052 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-212ENST00000528930 IFIT2P09913 472 aaKnown RBP10.26□□□□□ -0.77
SSBP3-212ENST00000528930 SLURP2P0DP57 97 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 PABPC4Q13310 644 aaKnown RBP eCLIP10.26□□□□□ -0.772e-66■■■■■ 36.3
SSBP3-212ENST00000528930 PICALMQ13492 652 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 ACAP1Q15027 740 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 LRRC41Q15345 812 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.26□□□□□ -0.77
SSBP3-212ENST00000528930 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.26□□□□□ -0.77
SSBP3-212ENST00000528930 CRBNQ96SW2 442 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 PORCNQ9H237 461 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 PCDHA11Q9Y5I1 949 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 GPR179Q6PRD1 2367 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 SIP14410 1827 aa10.26□□□□□ -0.77
SSBP3-212ENST00000528930 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.25□□□□□ -0.77
SSBP3-212ENST00000528930 PEX10O60683 326 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 PQBP1O60828 265 aaKnown RBP10.25□□□□□ -0.77
SSBP3-212ENST00000528930 HOXC6P09630 235 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 CSF2RAP15509 400 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 PKN1Q16512 942 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 PLEKHH3Q7Z736 793 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 GPRC5AQ8NFJ5 357 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 SH3RF3Q8TEJ3 882 aaPredicted RBP10.25□□□□□ -0.77
SSBP3-212ENST00000528930 PRR14Q9BWN1 585 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 LRRCC1Q9C099 1032 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 IRF2BPLQ9H1B7 796 aa10.25□□□□□ -0.77
SSBP3-212ENST00000528930 UBE2ZQ9H832 354 aaPredicted RBP10.25□□□□□ -0.77
SSBP3-212ENST00000528930 AATFQ9NY61 560 aaKnown RBP eCLIP10.25□□□□□ -0.77
SSBP3-212ENST00000528930 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.25□□□□□ -0.77
SSBP3-212ENST00000528930 CDK5RAP2Q96SN8 1893 aa10.24□□□□□ -0.77
SSBP3-212ENST00000528930 IDH1O75874 414 aaKnown RBP10.24□□□□□ -0.77
SSBP3-212ENST00000528930 BAG3O95817 575 aa10.24□□□□□ -0.77
SSBP3-212ENST00000528930 MYOGP15173 224 aa10.24□□□□□ -0.77
SSBP3-212ENST00000528930 ATP5JP18859 108 aa10.24□□□□□ -0.77
SSBP3-212ENST00000528930 RABGGTBP53611 331 aa10.24□□□□□ -0.77
SSBP3-212ENST00000528930 DYNLL1P63167 89 aaKnown RBP10.24□□□□□ -0.77
SSBP3-212ENST00000528930 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
SSBP3-212ENST00000528930 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-212ENST00000528930 TEX11Q8IYF3 940 aa10.24□□□□□ -0.77
SSBP3-212ENST00000528930 MAGEB6Q8N7X4 407 aa10.24□□□□□ -0.77
SSBP3-212ENST00000528930 EDC3Q96F86 508 aaKnown RBP10.24□□□□□ -0.77
SSBP3-212ENST00000528930 OSBPL5Q9H0X9 879 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms