RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
UBXN1-209ENST00000528907 ANKRD13CQ8N6S4 541 aa16.72■□□□□ 0.27
UBXN1-209ENST00000528907 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
UBXN1-209ENST00000528907 CPA4Q9UI42 421 aa16.72■□□□□ 0.27
UBXN1-209ENST00000528907 ISY1Q9ULR0 285 aaKnown RBP16.72■□□□□ 0.27
UBXN1-209ENST00000528907 CNTNAP5Q8WYK1 1306 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 MYH6P13533 1939 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
UBXN1-209ENST00000528907 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 SLC25A27O95847 323 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 ICAM1P05362 532 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 IFNAR1P17181 557 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 ADD1P35611 737 aaKnown RBP16.71■□□□□ 0.27
UBXN1-209ENST00000528907 CCNA1P78396 465 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 SCRN1Q12765 414 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 TRAF1Q13077 416 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 Q3C1V9 767 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 TKFCQ3LXA3 575 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.27
UBXN1-209ENST00000528907 RAB11FIP4Q86YS3 637 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 RIOX2Q8IUF8 465 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 CCDC144CPQ8IYA2 1237 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 TEX13BQ9BXU2 312 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 MAF1Q9H063 256 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 SPATC1LQ9H0A9 340 aa16.71■□□□□ 0.27
UBXN1-209ENST00000528907 SLKQ9H2G2 1235 aaPredicted RBP16.71■□□□□ 0.27
UBXN1-209ENST00000528907 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
UBXN1-209ENST00000528907 ZBTB5O15062 677 aa16.7■□□□□ 0.26
UBXN1-209ENST00000528907 STAT3P40763 770 aa16.7■□□□□ 0.26
UBXN1-209ENST00000528907 SP3Q02447 781 aa16.7■□□□□ 0.26
UBXN1-209ENST00000528907 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-209ENST00000528907 GTF3C6Q969F1 213 aa16.7■□□□□ 0.26
UBXN1-209ENST00000528907 SNX21Q969T3 373 aa16.7■□□□□ 0.26
UBXN1-209ENST00000528907 LARP6Q9BRS8 491 aaKnown RBP16.7■□□□□ 0.26
UBXN1-209ENST00000528907 RNF26Q9BY78 433 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-209ENST00000528907 CPVLQ9H3G5 476 aa16.7■□□□□ 0.26
UBXN1-209ENST00000528907 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
UBXN1-209ENST00000528907 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
UBXN1-209ENST00000528907 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
UBXN1-209ENST00000528907 LARGE1O95461 756 aa16.69■□□□□ 0.26
UBXN1-209ENST00000528907 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
UBXN1-209ENST00000528907 QRICH1Q2TAL8 776 aa16.69■□□□□ 0.26
UBXN1-209ENST00000528907 CPLX2Q6PUV4 134 aaKnown RBP16.69■□□□□ 0.26
UBXN1-209ENST00000528907 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
UBXN1-209ENST00000528907 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
UBXN1-209ENST00000528907 MROH8Q9H579 483 aa16.69■□□□□ 0.26
UBXN1-209ENST00000528907 CTDP1Q9Y5B0 961 aaPredicted RBP16.69■□□□□ 0.26
UBXN1-209ENST00000528907 PRPF3O43395 683 aaKnown RBP16.68■□□□□ 0.26
UBXN1-209ENST00000528907 FKTNO75072 461 aa16.68■□□□□ 0.26
UBXN1-209ENST00000528907 CDKL5O76039 1030 aa16.68■□□□□ 0.26
UBXN1-209ENST00000528907 CD2BP2O95400 341 aaKnown RBP16.68■□□□□ 0.26
UBXN1-209ENST00000528907 MAPK4P31152 587 aa16.68■□□□□ 0.26
UBXN1-209ENST00000528907 LACTBP83111 547 aaPredicted RBP16.68■□□□□ 0.26
UBXN1-209ENST00000528907 CHST13Q8NET6 341 aa16.68■□□□□ 0.26
UBXN1-209ENST00000528907 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
UBXN1-209ENST00000528907 PIGSQ96S52 555 aa16.68■□□□□ 0.26
UBXN1-209ENST00000528907 AMNQ9BXJ7 453 aa16.68■□□□□ 0.26
UBXN1-209ENST00000528907 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
UBXN1-209ENST00000528907 RBBP6Q7Z6E9 1792 aaKnown RBP16.67■□□□□ 0.26
UBXN1-209ENST00000528907 hCG_1984214I3L0E3 225 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 GNRH1P01148 92 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 STK3Q13188 491 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 SNRNP48Q6IEG0 339 aaKnown RBP16.67■□□□□ 0.26
UBXN1-209ENST00000528907 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 TEX2Q8IWB9 1127 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 CMTR1Q8N1G2 835 aaKnown RBP16.67■□□□□ 0.26
UBXN1-209ENST00000528907 ZNF713Q8N859 430 aaPredicted RBP16.67■□□□□ 0.26
UBXN1-209ENST00000528907 ZNF296Q8WUU4 475 aaPredicted RBP16.67■□□□□ 0.26
UBXN1-209ENST00000528907 ERO1AQ96HE7 468 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
UBXN1-209ENST00000528907 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
UBXN1-209ENST00000528907 VAT1LQ9HCJ6 419 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 FBXO40Q9UH90 709 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 ABCB11O95342 1321 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 STK36Q9NRP7 1315 aa16.67■□□□□ 0.26
UBXN1-209ENST00000528907 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 CPLX1O14810 134 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 STRNO43815 780 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
UBXN1-209ENST00000528907 GHRHRQ02643 423 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 CCDC174Q6PII3 467 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
UBXN1-209ENST00000528907 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 CPXCR1Q8N123 301 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 FAM177A1Q8N128 213 aaPredicted RBP16.66■□□□□ 0.26
UBXN1-209ENST00000528907 SAMD3Q8N6K7 520 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 AGBL1Q96MI9 1066 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 PORCNQ9H237 461 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
UBXN1-209ENST00000528907 CCPG1Q9ULG6 757 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 RIPK3Q9Y572 518 aa16.66■□□□□ 0.26
UBXN1-209ENST00000528907 PEX10O60683 326 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 PPP1R11O60927 126 aaPredicted RBP16.65■□□□□ 0.26
UBXN1-209ENST00000528907 CTDNEP1O95476 244 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 ERCC3P19447 782 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 FCGRTP55899 365 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 SOX10P56693 466 aa16.65■□□□□ 0.26
UBXN1-209ENST00000528907 SNAP25P60880 206 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms