RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 THAP11Q96EK4 314 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 TMEM87BQ96K49 555 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 C12orf42Q96LP6 360 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 FEZ1Q99689 392 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 PTPN18Q99952 460 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
CDC27-206ENST00000528748 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 PTPRFP10586 1907 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 MYH4Q9Y623 1939 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 TNKSO95271 1327 aa12.87□□□□□ -0.35
CDC27-206ENST00000528748 ERICH2A1L162 156 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 BTBD19C9JJ37 291 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 F5H6K3 240 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 TRIM66O15016 1216 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 CPA1P15085 419 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
CDC27-206ENST00000528748 KLRC3Q07444 240 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 SREBF2Q12772 1141 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 DGKZQ13574 1117 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
CDC27-206ENST00000528748 KIAA1755Q5JYT7 1200 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 GPAT2Q6NUI2 795 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 TMTC2Q8N394 836 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
CDC27-206ENST00000528748 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
CDC27-206ENST00000528748 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
CDC27-206ENST00000528748 RPS6KB1P23443 525 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 WTAPQ15007 396 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 TMEM67Q5HYA8 995 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
CDC27-206ENST00000528748 SLFN13Q68D06 897 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 ANKRD23Q86SG2 305 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
CDC27-206ENST00000528748 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 LPAR1Q92633 364 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
CDC27-206ENST00000528748 IGF2BP3O00425 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDC27-206ENST00000528748 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
CDC27-206ENST00000528748 NDUFB10O96000 172 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
CDC27-206ENST00000528748 LIFRP42702 1097 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 TREML2Q5T2D2 321 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 OTUD7BQ6GQQ9 843 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 FBXL16Q8N461 479 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 TCEANC2Q96MN5 208 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 KAT14Q9H8E8 782 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 LY9Q9HBG7 655 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 AGTPBP1Q9UPW5 1226 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
CDC27-206ENST00000528748 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 PDHXO00330 501 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 HOXA2O43364 376 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 RAD21O60216 631 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 VCAM1P19320 739 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 CATSPERGQ6ZRH7 1159 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 Q6ZUG5 572 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 PNMA1Q8ND90 353 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 GMCL1Q96IK5 515 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 KIF2CQ99661 725 aa12.83□□□□□ -0.36
CDC27-206ENST00000528748 ZCCHC17Q9NP64 241 aaKnown RBP12.83□□□□□ -0.36
CDC27-206ENST00000528748 WDR46O15213 610 aaKnown RBP12.82□□□□□ -0.36
CDC27-206ENST00000528748 SLC1A4P43007 532 aa12.82□□□□□ -0.36
CDC27-206ENST00000528748 MAP2K1Q02750 393 aaPredicted RBP12.82□□□□□ -0.36
CDC27-206ENST00000528748 PABPC4Q13310 644 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDC27-206ENST00000528748 SGMS1Q86VZ5 419 aa12.82□□□□□ -0.36
CDC27-206ENST00000528748 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
CDC27-206ENST00000528748 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
CDC27-206ENST00000528748 ALDH8A1Q9H2A2 487 aaPredicted RBP12.82□□□□□ -0.36
CDC27-206ENST00000528748 RPAP3Q9H6T3 665 aaPredicted RBP12.82□□□□□ -0.36
CDC27-206ENST00000528748 PDRG1Q9NUG6 133 aa12.82□□□□□ -0.36
CDC27-206ENST00000528748 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
CDC27-206ENST00000528748 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 ALDH1A1P00352 501 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 PDHBP11177 359 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 BMP3P12645 472 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 FGD1P98174 961 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 COG2Q14746 738 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 FAM83BQ5T0W9 1011 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 RNF19BQ6ZMZ0 732 aa12.81□□□□□ -0.36
CDC27-206ENST00000528748 NFXL1Q6ZNB6 911 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms