RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 MYH15Q9Y2K3 1946 aa8.79□□□□□ -1
SOX6-211ENST00000528429 A0A087WWV3 80 aa8.78□□□□□ -1
SOX6-211ENST00000528429 SNHG28P0DPA3 235 aa8.78□□□□□ -1
SOX6-211ENST00000528429 CMA1P23946 247 aa8.78□□□□□ -1
SOX6-211ENST00000528429 TYRO3Q06418 890 aa8.78□□□□□ -1
SOX6-211ENST00000528429 RASA3Q14644 834 aa8.78□□□□□ -1
SOX6-211ENST00000528429 TTC38Q5R3I4 469 aa8.78□□□□□ -1
SOX6-211ENST00000528429 GPATCH4Q5T3I0 446 aaKnown RBP8.78□□□□□ -1
SOX6-211ENST00000528429 SHC4Q6S5L8 630 aa8.78□□□□□ -1
SOX6-211ENST00000528429 SASS6Q6UVJ0 657 aa8.78□□□□□ -1
SOX6-211ENST00000528429 ADGRF4Q8IZF3 695 aa8.78□□□□□ -1
SOX6-211ENST00000528429 FMR1NBQ8N0W7 255 aaPredicted RBP8.78□□□□□ -1
SOX6-211ENST00000528429 TNFRSF25Q93038 417 aa8.78□□□□□ -1
SOX6-211ENST00000528429 YY1AP1Q9H869 796 aa8.78□□□□□ -1
SOX6-211ENST00000528429 SH3GLB2Q9NR46 395 aa8.78□□□□□ -1
SOX6-211ENST00000528429 NYAP2Q9P242 653 aa8.78□□□□□ -1
SOX6-211ENST00000528429 SMCO2A6NFE2 343 aa8.78□□□□□ -1
SOX6-211ENST00000528429 USP17L10C9JJH3 530 aa8.78□□□□□ -1
SOX6-211ENST00000528429 F5H6K3 240 aa8.78□□□□□ -1
SOX6-211ENST00000528429 CUTAO60888 179 aa8.78□□□□□ -1
SOX6-211ENST00000528429 ZNF202O95125 648 aa8.78□□□□□ -1
SOX6-211ENST00000528429 SYKP43405 635 aa8.78□□□□□ -1
SOX6-211ENST00000528429 KLRC3Q07444 240 aa8.78□□□□□ -1
SOX6-211ENST00000528429 MYBPC2Q14324 1141 aa8.78□□□□□ -1
SOX6-211ENST00000528429 ZYXQ15942 572 aaKnown RBP8.78□□□□□ -1
SOX6-211ENST00000528429 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
SOX6-211ENST00000528429 SIAH1Q8IUQ4 282 aa8.78□□□□□ -1
SOX6-211ENST00000528429 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
SOX6-211ENST00000528429 CCDC12Q8WUD4 166 aaPredicted RBP8.78□□□□□ -1
SOX6-211ENST00000528429 RIOX1Q9H6W3 641 aa8.78□□□□□ -1
SOX6-211ENST00000528429 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
SOX6-211ENST00000528429 RPS6KL1Q9Y6S9 549 aa8.78□□□□□ -1
SOX6-211ENST00000528429 MYH8P13535 1937 aa8.78□□□□□ -1
SOX6-211ENST00000528429 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1
SOX6-211ENST00000528429 RPS12P25398 132 aaKnown RBP8.77□□□□□ -1
SOX6-211ENST00000528429 ECE1P42892 770 aa8.77□□□□□ -1
SOX6-211ENST00000528429 TNNI2P48788 182 aa8.77□□□□□ -1
SOX6-211ENST00000528429 IRX5P78411 483 aaPredicted RBP8.77□□□□□ -1
SOX6-211ENST00000528429 INF2Q27J81 1249 aa8.77□□□□□ -1
SOX6-211ENST00000528429 METTL16Q86W50 562 aaKnown RBP8.77□□□□□ -1
SOX6-211ENST00000528429 PDILTQ8N807 584 aa8.77□□□□□ -1
SOX6-211ENST00000528429 JMJD4Q9H9V9 463 aa8.77□□□□□ -1
SOX6-211ENST00000528429 FBXO2Q9UK22 296 aaPredicted RBP8.77□□□□□ -1
SOX6-211ENST00000528429 LTBP3Q9NS15 1303 aa8.77□□□□□ -1
SOX6-211ENST00000528429 FER1L6Q2WGJ9 1857 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 FZD9O00144 591 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 SNAP25P60880 206 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 PTGDRQ13258 359 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 ANO6Q4KMQ2 910 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 FKBP1CQ5VVH2 108 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 JAKMIP3Q5VZ66 844 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 FAM83AQ86UY5 434 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 ACER1Q8TDN7 264 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 ZBED3Q96IU2 234 aaPredicted RBP8.77□□□□□ -1.01
SOX6-211ENST00000528429 FUCA2Q9BTY2 467 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 C6orf50Q9HD87 102 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 BIN2Q9UBW5 565 aaPredicted RBP8.77□□□□□ -1.01
SOX6-211ENST00000528429 A0A1W2PRG0 241 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 VWA3AA6NCI4 1184 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 CTAGE5O15320 804 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 NDUFB10O96000 172 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 PTPREP23469 700 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 ZNF280AP59817 542 aaPredicted RBP8.77□□□□□ -1.01
SOX6-211ENST00000528429 SLC20A2Q08357 652 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 ZRSR1Q15695 479 aaKnown RBP8.77□□□□□ -1.01
SOX6-211ENST00000528429 KIF4BQ2VIQ3 1234 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 ZMYND12Q9H0C1 365 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 CSRNP2Q9H175 543 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 KCNH3Q9ULD8 1083 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 ZBTB21Q9ULJ3 1066 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 PCDHA6Q9UN73 950 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 PCDHA8Q9Y5H6 950 aa8.77□□□□□ -1.01
SOX6-211ENST00000528429 SIPA1L1O43166 1804 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 PSME4Q14997 1843 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 BRCA1P38398 1863 aaKnown RBP8.76□□□□□ -1.01
SOX6-211ENST00000528429 TMEM232C9JQI7 657 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 BIN1O00499 593 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 SCP2P22307 547 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 SMARCA1P28370 1054 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 GNA11P29992 359 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 TNFAIP1Q13829 316 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 PRAMEF18Q5VWM3 479 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 RESP18Q5W5W9 173 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 USP49Q70CQ1 688 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 REXO1Q8N1G1 1221 aaKnown RBP8.76□□□□□ -1.01
SOX6-211ENST00000528429 MKL1Q969V6 931 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 DNAJC25Q9H1X3 360 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 ARHGEF10LQ9HCE6 1279 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 FAM13BQ9NYF5 915 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 HACL1Q9UJ83 578 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 PNMA6FA0A0J9YX94 578 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 H7C1D1 291 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 ZBTB5O15062 677 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 PPP1R11O60927 126 aaPredicted RBP8.76□□□□□ -1.01
SOX6-211ENST00000528429 LMNB1P20700 586 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 SATB1Q01826 763 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 GALNT17Q6IS24 598 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 RBM43Q6ZSC3 357 aaKnown RBP8.76□□□□□ -1.01
SOX6-211ENST00000528429 DCAF4Q8WV16 495 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 DPF2Q92785 391 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms