RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 SH2D4AQ9H788 454 aa9.09□□□□□ -0.95
SORL1-207ENST00000528339 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
SORL1-207ENST00000528339 SLC26A4O43511 780 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 PPP6R2O75170 966 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 PDCP20941 246 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 CCT2P78371 535 aaKnown RBP9.08□□□□□ -0.96
SORL1-207ENST00000528339 Q4G0T1 1027 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 ZNF579Q8NAF0 562 aaKnown RBP9.08□□□□□ -0.96
SORL1-207ENST00000528339 CNKSR2Q8WXI2 1034 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 WRNIP1Q96S55 665 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 FZD1Q9UP38 647 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 SCAF8Q9UPN6 1271 aaKnown RBP9.08□□□□□ -0.96
SORL1-207ENST00000528339 PFASO15067 1338 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 RXRAP19793 462 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 SSRP1Q08945 709 aaKnown RBP9.08□□□□□ -0.96
SORL1-207ENST00000528339 SNW1Q13573 536 aaKnown RBP9.08□□□□□ -0.96
SORL1-207ENST00000528339 QRICH1Q2TAL8 776 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 TKFCQ3LXA3 575 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 MICU3Q86XE3 530 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 FUCA2Q9BTY2 467 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 ABCB11O95342 1321 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 MYH11P35749 1972 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 BCRP11274 1271 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 SREBF1P36956 1147 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 PRPHP41219 470 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 RBM5P52756 815 aaKnown RBP eCLIP9.08□□□□□ -0.96
SORL1-207ENST00000528339 NOSTRINQ8IVI9 506 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 LINC00301Q8NCQ3 95 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 SPATA20Q8TB22 786 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 ETNPPLQ8TBG4 499 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 WASF1Q92558 559 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 PGBD1Q96JS3 809 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 PIGSQ96S52 555 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 AS3MTQ9HBK9 375 aa9.08□□□□□ -0.96
SORL1-207ENST00000528339 FBXO2Q9UK22 296 aaPredicted RBP9.08□□□□□ -0.96
SORL1-207ENST00000528339 RBM47A0AV96 593 aaKnown RBP9.07□□□□□ -0.96
SORL1-207ENST00000528339 YEATS4O95619 227 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 MTMR2Q13614 643 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 VEZTQ9HBM0 779 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 ORC3Q9UBD5 711 aaPredicted RBP9.07□□□□□ -0.96
SORL1-207ENST00000528339 SCN10AQ9Y5Y9 1956 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 ATP2C1P98194 919 aaPredicted RBP9.07□□□□□ -0.96
SORL1-207ENST00000528339 TMEM132BQ14DG7 1078 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 MYSM1Q5VVJ2 828 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 MCTP2Q6DN12 878 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 RIOX2Q8IUF8 465 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 LRRC15Q8TF66 581 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 BRI3BPQ8WY22 251 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 COL20A1Q9P218 1284 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 PNMA2Q9UL42 364 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 IREB2P48200 963 aaKnown RBP9.07□□□□□ -0.96
SORL1-207ENST00000528339 STAT2P52630 851 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 MDM2Q00987 491 aaPredicted RBP9.07□□□□□ -0.96
SORL1-207ENST00000528339 CDC37Q16543 378 aaPredicted RBP9.07□□□□□ -0.96
SORL1-207ENST00000528339 MAMDC4Q6UXC1 1216 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 BTBD7Q9P203 1132 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 DOCK3Q8IZD9 2030 aa9.07□□□□□ -0.96
SORL1-207ENST00000528339 A0A1W2PQ27 194 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 A0A1W2PQ64 194 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 A0A1W2PQD8 194 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 FAM83BQ5T0W9 1011 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 MOB2Q70IA6 237 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 ALG1Q9BT22 464 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 RBPJLQ9UBG7 517 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 ERICH2A1L162 156 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 HOXD8P13378 290 aaPredicted RBP9.06□□□□□ -0.96
SORL1-207ENST00000528339 AP3B2Q13367 1082 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 E2F4Q16254 413 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 PRAMEF18Q5VWM3 479 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 ABRAQ8N0Z2 381 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 CMTR1Q8N1G2 835 aaKnown RBP9.06□□□□□ -0.96
SORL1-207ENST00000528339 MB21D1Q8N884 522 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 IGSF22Q8N9C0 903 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 GPT2Q8TD30 523 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 GTF3C2Q8WUA4 911 aaPredicted RBP9.06□□□□□ -0.96
SORL1-207ENST00000528339 SLF1Q9BQI6 1058 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 TANGO6Q9C0B7 1094 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 SMC3Q9UQE7 1217 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 SLC39A14Q15043 492 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 SULF1Q8IWU6 871 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 PRPF38AQ8NAV1 312 aaKnown RBP9.06□□□□□ -0.96
SORL1-207ENST00000528339 OPTNQ96CV9 577 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 R3HDMLQ9H3Y0 253 aa9.06□□□□□ -0.96
SORL1-207ENST00000528339 V9GY48 417 aaPredicted RBP9.06□□□□□ -0.96
SORL1-207ENST00000528339 COL4A4P53420 1690 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 CAP1Q01518 475 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 SLC4A8Q2Y0W8 1093 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 ZNF467Q7Z7K2 595 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 CTCFLQ8NI51 663 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 NUP88Q99567 741 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 SENP7Q9BQF6 1050 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 FAM205CA6NFA0 338 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 RGS20O76081 388 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 RRP12Q5JTH9 1297 aaKnown RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 MORN1Q5T089 497 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 NT5DC1Q5TFE4 455 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 KCTD1Q719H9 257 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 HAS1Q92839 578 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms