RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TTLL1O95922 423 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 MCM5P33992 734 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 ATN1P54259 1190 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 USP17L24Q0WX57 530 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 RCSD1Q6JBY9 416 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 UPF3BQ9BZI7 483 aaKnown RBP13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 SENP2Q9HC62 589 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 GPHNQ9NQX3 736 aaPredicted RBP13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 TCP11L1Q9NUJ3 509 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
CCDC90B-210ENST00000528149 IFIT3O14879 490 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 ANAPC15P60006 121 aa13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 GRIN2CQ14957 1233 aa13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 SEC23AQ15436 765 aa13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 TMEM67Q5HYA8 995 aa13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 MORF4L1Q9UBU8 362 aa13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 PRKAG2Q9UGJ0 569 aa13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 BAZ2BQ9UIF8 2168 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-210ENST00000528149 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.24
CCDC90B-210ENST00000528149 F5H6K3 240 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 FLOT1O75955 427 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 RPS6KB1P23443 525 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 PSMA5P28066 241 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 GCLCP48506 637 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 NT5C2P49902 561 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 USP14P54578 494 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 RTP1P59025 263 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 ERVK-9P63128 1117 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 ERVK-24P63145 666 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 KLRC3Q07444 240 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 SART3Q15020 963 aaKnown RBP13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 IFIT1BQ5T764 474 aaKnown RBP13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 UHRF1Q96T88 793 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 TMEM47Q9BQJ4 181 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 SH2D4AQ9H788 454 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 LY9Q9HBG7 655 aa13.52□□□□□ -0.25
CCDC90B-210ENST00000528149 MYO9BQ13459 2157 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 WDR19Q8NEZ3 1342 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 ERICH2A1L162 156 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 HMGB1P09429 215 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 TOP1P11387 765 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 NOVP48745 357 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 RBM25P49756 843 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 WTAPQ15007 396 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 CCL14Q16627 93 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 DHX32Q7L7V1 743 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 REPS2Q8NFH8 660 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 IGDCC4Q8TDY8 1250 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 ZSWIM6Q9HCJ5 1215 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 GOPCQ9HD26 462 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 CYP46A1Q9Y6A2 500 aa13.51□□□□□ -0.25
CCDC90B-210ENST00000528149 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 XRCC5P13010 732 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 DSG3P32926 999 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 PABPC4Q13310 644 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 TMEM132BQ14DG7 1078 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 CCDC178Q5BJE1 867 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 SLFN13Q68D06 897 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 RUFY3Q7L099 469 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 ATXN2LQ8WWM7 1075 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 SOCS4Q8WXH5 440 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 BADQ92934 168 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 TMEM87BQ96K49 555 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 ASB2Q96Q27 587 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 KIF2CQ99661 725 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 NUDT12Q9BQG2 462 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 MOV10L1Q9BXT6 1211 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 TM6SF1Q9BZW5 370 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 PRDM5Q9NQX1 630 aaPredicted RBP13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 THEGQ9P2T0 379 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 ISY1Q9ULR0 285 aaKnown RBP13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 ATP11BQ9Y2G3 1177 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 SMCHD1A6NHR9 2005 aa13.5□□□□□ -0.25
CCDC90B-210ENST00000528149 SLC16A2P36021 539 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 FGD1P98174 961 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 WDR78Q5VTH9 848 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 LBX2Q6XYB7 198 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 Q6ZUG5 572 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 RAB11FIP4Q86YS3 637 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 PPM1EQ8WY54 764 aa13.49□□□□□ -0.25
CCDC90B-210ENST00000528149 ANKS1AQ92625 1134 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms