RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 NMT2O60551 498 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 TOP1P11387 765 aaKnown RBP15.81■□□□□ 0.12
CAPN1-207ENST00000527189 SLC4A3P48751 1232 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 IKQ13123 557 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-207ENST00000527189 LRRC41Q15345 812 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 AKNAD1Q5T1N1 836 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 C1orf53Q5VUE5 145 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 RNF180Q86T96 592 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 ACAD9Q9H845 621 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
CAPN1-207ENST00000527189 ISY1Q9ULR0 285 aaKnown RBP15.81■□□□□ 0.12
CAPN1-207ENST00000527189 ZNF536O15090 1300 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 ZNF213O14771 459 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 SNAI1O95863 264 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-207ENST00000527189 SYN1P17600 705 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-207ENST00000527189 RRP12Q5JTH9 1297 aaKnown RBP15.8■□□□□ 0.12
CAPN1-207ENST00000527189 ANO1Q5XXA6 986 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 BTNL9Q6UXG8 535 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 SLC39A5Q6ZMH5 540 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 KCTD1Q719H9 257 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 ABHD16BQ9H3Z7 469 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 DIAPH3Q9NSV4 1193 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 PRR12Q9ULL5 1215 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 TTC28Q96AY4 2481 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
CAPN1-207ENST00000527189 TAL1P17542 331 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-207ENST00000527189 ATN1P54259 1190 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-207ENST00000527189 SNX17Q15036 470 aa15.79■□□□□ 0.12
CAPN1-207ENST00000527189 CCDC178Q5BJE1 867 aa15.79■□□□□ 0.12
CAPN1-207ENST00000527189 CWC27Q6UX04 472 aaKnown RBP15.79■□□□□ 0.12
CAPN1-207ENST00000527189 ESR2Q92731 530 aa15.79■□□□□ 0.12
CAPN1-207ENST00000527189 TMEM47Q9BQJ4 181 aa15.79■□□□□ 0.12
CAPN1-207ENST00000527189 TSEN34Q9BSV6 310 aaKnown RBP15.79■□□□□ 0.12
CAPN1-207ENST00000527189 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
CAPN1-207ENST00000527189 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
CAPN1-207ENST00000527189 SMCHD1A6NHR9 2005 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 DUSP11O75319 330 aaKnown RBP15.78■□□□□ 0.12
CAPN1-207ENST00000527189 ADCYAP1R1P41586 468 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 RTP1P59025 263 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 HAND2P61296 217 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 ACVR2BQ13705 512 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 Q7L0L9 218 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 FAM133AQ8N9E0 248 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 AGBL1Q96MI9 1066 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 DSCC1Q9BVC3 393 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 RNF146Q9NTX7 359 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-207ENST00000527189 PRKAG2Q9UGJ0 569 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 CTNNA3Q9UI47 895 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 DNAH12Q6ZR08 3092 aa15.78■□□□□ 0.12
CAPN1-207ENST00000527189 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-207ENST00000527189 ICAM1P05362 532 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 GPR153Q6NV75 609 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 DGKHQ86XP1 1220 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 TDHQ8IZJ6 230 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 DEFB123Q8N688 67 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 FGD4Q96M96 766 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 LBHD1Q9BQE6 289 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-207ENST00000527189 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.12
CAPN1-207ENST00000527189 RANBP17Q9H2T7 1088 aaKnown RBP15.77■□□□□ 0.12
CAPN1-207ENST00000527189 A1CFQ9NQ94 594 aaKnown RBP15.77■□□□□ 0.12
CAPN1-207ENST00000527189 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 STXBP5LQ9Y2K9 1186 aa15.77■□□□□ 0.12
CAPN1-207ENST00000527189 CDH23Q9H251 3354 aa15.77■□□□□ 0.11
CAPN1-207ENST00000527189 MOXD2PA6NHM9 499 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 ASB14A6NK59 587 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 ADAMTS4O75173 837 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 PGK1P00558 417 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 SNHG28P0DPA3 235 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 PDHBP11177 359 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 ALAS1P13196 640 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 CCDC96Q2M329 555 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 ARMCX2Q7L311 632 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 TBC1D10CQ8IV04 446 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 KLHDC9Q8NEP7 349 aa15.76■□□□□ 0.11
CAPN1-207ENST00000527189 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-207ENST00000527189 CNTN2Q02246 1040 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 IMMTQ16891 758 aaKnown RBP15.75■□□□□ 0.11
CAPN1-207ENST00000527189 GPATCH4Q5T3I0 446 aaKnown RBP15.75■□□□□ 0.11
CAPN1-207ENST00000527189 SYDE2Q5VT97 1194 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 CCDC174Q6PII3 467 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 CCDC144CPQ8IYA2 1237 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 NUP133Q8WUM0 1156 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 CHMP4CQ96CF2 233 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 CCPG1Q9ULG6 757 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 MTMR7Q9Y216 660 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 ATP11BQ9Y2G3 1177 aa15.75■□□□□ 0.11
CAPN1-207ENST00000527189 LOC102724159A0A0B4J2E5 919 aa15.74■□□□□ 0.11
CAPN1-207ENST00000527189 CST5P28325 142 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-207ENST00000527189 NKX3-2P78367 333 aa15.74■□□□□ 0.11
CAPN1-207ENST00000527189 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms