RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CASP14P31944 242 aa19.83■□□□□ 0.77
USH1C-205ENST00000527020 FXR1P51114 621 aaKnown RBP eCLIP19.83■□□□□ 0.77
USH1C-205ENST00000527020 TCP11X2Q5H9J9 407 aa19.83■□□□□ 0.77
USH1C-205ENST00000527020 ADSSL1Q8N142 457 aa19.83■□□□□ 0.77
USH1C-205ENST00000527020 DDX41Q9UJV9 622 aaKnown RBP19.83■□□□□ 0.77
USH1C-205ENST00000527020 SMCO2A6NFE2 343 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 USP17L5A8MUK1 530 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 FECHP22830 423 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 SMARCA1P28370 1054 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 COPB1P53618 953 aaKnown RBP19.83■□□□□ 0.76
USH1C-205ENST00000527020 IRF2BP1Q8IU81 584 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 SLF2Q8IX21 1173 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 SMAP1Q8IYB5 467 aaPredicted RBP19.83■□□□□ 0.76
USH1C-205ENST00000527020 KIFC2Q96AC6 838 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 PLIN2Q99541 437 aa19.83■□□□□ 0.76
USH1C-205ENST00000527020 PLIN4Q96Q06 1357 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 ADAMTSL1Q8N6G6 1762 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 KCNJ18B7U540 433 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 C6orf229H3BNL8 230 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 URI1O94763 535 aaPredicted RBP19.82■□□□□ 0.76
USH1C-205ENST00000527020 PRKCSHP14314 528 aaPredicted RBP19.82■□□□□ 0.76
USH1C-205ENST00000527020 UBA7P41226 1012 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 GNG11P61952 73 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 KCNJ12Q14500 433 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 KCNB1Q14721 858 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 MEX3CQ5U5Q3 659 aaKnown RBP19.82■□□□□ 0.76
USH1C-205ENST00000527020 KRT25Q7Z3Z0 450 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 RRP36Q96EU6 259 aaKnown RBP19.82■□□□□ 0.76
USH1C-205ENST00000527020 PIGSQ96S52 555 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 NAA15Q9BXJ9 866 aaKnown RBP19.82■□□□□ 0.76
USH1C-205ENST00000527020 TAB2Q9NYJ8 693 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 ADGRG1Q9Y653 693 aa19.82■□□□□ 0.76
USH1C-205ENST00000527020 RNF225M0QZC1 329 aaPredicted RBP19.81■□□□□ 0.76
USH1C-205ENST00000527020 GTF2IP78347 998 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 NONOQ15233 471 aaKnown RBP eCLIP19.81■□□□□ 0.76
USH1C-205ENST00000527020 VPS16Q9H269 839 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 TRIM49BA6NDI0 452 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 N4BP3O15049 544 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 OR52Z1P0C646 297 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 H2AFXP16104 143 aaPredicted RBP19.81■□□□□ 0.76
USH1C-205ENST00000527020 PMS1P54277 932 aaKnown RBP19.81■□□□□ 0.76
USH1C-205ENST00000527020 GABPAQ06546 454 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 SPAG1Q07617 926 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 CCDC12Q8WUD4 166 aaPredicted RBP19.81■□□□□ 0.76
USH1C-205ENST00000527020 UBA5Q9GZZ9 404 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 RIOX1Q9H6W3 641 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 VAT1LQ9HCJ6 419 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 C6orf50Q9HD87 102 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 OGFRQ9NZT2 677 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 BRWD3Q6RI45 1802 aa19.81■□□□□ 0.76
USH1C-205ENST00000527020 A0A0U1RQJ8 604 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 PDHBP11177 359 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 TXNRD1Q16881 649 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 LETM2Q2VYF4 491 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 SLC27A3Q5K4L6 730 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 ATRIPQ8WXE1 791 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 CCNT1O60563 726 aaKnown RBP19.8■□□□□ 0.76
USH1C-205ENST00000527020 TADA3O75528 432 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 RHOBTB3O94955 611 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 MYL1P05976 194 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 CCDC175P0C221 793 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 PLCG1P19174 1290 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 CNGA4Q8IV77 575 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 RASSF8Q8NHQ8 419 aa19.8■□□□□ 0.76
USH1C-205ENST00000527020 SRRTQ9BXP5 876 aaKnown RBP19.8■□□□□ 0.76
USH1C-205ENST00000527020 IGKV6D-41A0A0C4DH26 115 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 H7C1D1 291 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 PPEF1O14829 653 aaPredicted RBP19.79■□□□□ 0.76
USH1C-205ENST00000527020 GNA11P29992 359 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 CASQ1P31415 396 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 MAP3K9P80192 1104 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 NEK8Q86SG6 692 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 CABP7Q86V35 215 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 SP8Q8IXZ3 490 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 CERS5Q8N5B7 392 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 CCDC51Q96ER9 411 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 AK8Q96MA6 479 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 CARD6Q9BX69 1037 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 IRX2Q9BZI1 471 aaPredicted RBP19.79■□□□□ 0.76
USH1C-205ENST00000527020 DDX4Q9NQI0 724 aaKnown RBP19.79■□□□□ 0.76
USH1C-205ENST00000527020 ZNF446Q9NWS9 450 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 MTMR4Q9NYA4 1195 aa19.79■□□□□ 0.76
USH1C-205ENST00000527020 SEC63Q9UGP8 760 aaKnown RBP19.79■□□□□ 0.76
USH1C-205ENST00000527020 ESYT2A0FGR8 921 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 RIMBP2O15034 1052 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 GIMAP8Q8ND71 665 aaPredicted RBP19.78■□□□□ 0.76
USH1C-205ENST00000527020 PRDM10Q9NQV6 1147 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 TMEM260Q9NX78 707 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 TRPC5Q9UL62 973 aaPredicted RBP19.78■□□□□ 0.76
USH1C-205ENST00000527020 FRMPD2Q68DX3 1309 aaPredicted RBP19.78■□□□□ 0.76
USH1C-205ENST00000527020 GREB1LQ9C091 1923 aaPredicted RBP19.78■□□□□ 0.76
USH1C-205ENST00000527020 AKR1B1P15121 316 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 PICALMQ13492 652 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 TBCKQ8TEA7 893 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 MMTAG2Q9BU76 263 aaKnown RBP19.78■□□□□ 0.76
USH1C-205ENST00000527020 BIN2Q9UBW5 565 aaPredicted RBP19.78■□□□□ 0.76
USH1C-205ENST00000527020 NRXN2Q9P2S2 1712 aa19.78■□□□□ 0.76
USH1C-205ENST00000527020 ERVK-24P63145 666 aa19.77■□□□□ 0.76
USH1C-205ENST00000527020 CLEC10AQ8IUN9 316 aa19.77■□□□□ 0.76
USH1C-205ENST00000527020 CUEDC2Q9H467 287 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms