RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 R3HCC1Q9Y3T6 440 aaKnown RBP4.03□□□□□ -1.76
TRAPPC4-207ENST00000526141 TACC3Q9Y6A5 838 aa4.03□□□□□ -1.76
TRAPPC4-207ENST00000526141 PPFIA4O75335 1185 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 LTKP29376 864 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 MASP1P48740 699 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 DUSP4Q13115 394 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 PWP1Q13610 501 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 C4orf46Q504U0 113 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 WIPI1Q5MNZ9 446 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 SLC6A19Q695T7 634 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 GGNQ86UU5 652 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 HNRNPLLQ8WVV9 542 aaKnown RBP4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 SGSM3Q96HU1 749 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 SIGLEC10Q96LC7 697 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 RPS6KC1Q96S38 1066 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 OSBPL7Q9BZF2 842 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 GPR62Q9BZJ7 368 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 HOMER2Q9NSB8 354 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 TMEM260Q9NX78 707 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 EFR3BQ9Y2G0 817 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 MSRB2Q9Y3D2 182 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 IRAK3Q9Y616 596 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 EID1Q9Y6B2 187 aa4.02□□□□□ -1.77
TRAPPC4-207ENST00000526141 ESYT3A0FGR9 886 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 OR14I1A6ND48 311 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 OTOL1A6NHN0 477 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 KIF3BO15066 747 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 FBXO24O75426 580 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 GRK4P32298 578 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 IRX6P78412 446 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 EXOSC10Q01780 885 aaKnown RBP4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 IFRD2Q12894 506 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 UBE4AQ14139 1066 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 TNNI3KQ59H18 835 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 TSPYL5Q86VY4 417 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 TEX2Q8IWB9 1127 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 MRPL41Q8IXM3 137 aaKnown RBP4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 SP8Q8IXZ3 490 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 LILRB2Q8N423 598 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 ANKS4BQ8N8V4 417 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 PPP1R13LQ8WUF5 828 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 CPLX3Q8WVH0 158 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 EVI5LQ96CN4 794 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 RSRP1Q9BUV0 290 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 SGPP1Q9BX95 441 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 TMPRSS5Q9H3S3 457 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 GINM1Q9NU53 330 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 SIRT5Q9NXA8 310 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 TERF2IPQ9NYB0 399 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 ADAMTS1Q9UHI8 967 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 GPR160Q9UJ42 338 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 THRAP3Q9Y2W1 955 aaKnown RBP4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 MRVI1Q9Y6F6 885 aa4.01□□□□□ -1.77
TRAPPC4-207ENST00000526141 CCDC85CA6NKD9 419 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 HRKO00198 91 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 CENPBP07199 599 aaPredicted RBP4□□□□□ -1.77
TRAPPC4-207ENST00000526141 LMNB1P20700 586 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 AFF3P51826 1226 aaKnown RBP4□□□□□ -1.77
TRAPPC4-207ENST00000526141 NFKB2Q00653 900 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 SSPNQ14714 243 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 ZXDCQ2QGD7 858 aaPredicted RBP4□□□□□ -1.77
TRAPPC4-207ENST00000526141 SPATS1Q496A3 300 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 TIGD5Q53EQ6 642 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 RASIP1Q5U651 963 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 SV2BQ7L1I2 683 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 KRT26Q7Z3Y9 468 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 Q96M66 194 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 DNAJC7Q99615 494 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 KANSL2Q9H9L4 492 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 CEP131Q9UPN4 1083 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 COMMD10Q9Y6G5 202 aa4□□□□□ -1.77
TRAPPC4-207ENST00000526141 WASH4PA8MWX3 477 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 SH3BP5O60239 455 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PLIN1O60240 522 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PGRP06401 933 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PI3P19957 117 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 SRSF3P84103 164 aaKnown RBP3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 SETQ01105 290 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PTPN11Q06124 597 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PDE4BQ07343 736 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 SQSTM1Q13501 440 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 HDAC1Q13547 482 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 RASGRF1Q13972 1273 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 LONRF3Q496Y0 759 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 OLFML2BQ68BL8 750 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 RELL1Q8IUW5 271 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 SYNPOQ8N3V7 929 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PNISRQ8TF01 805 aaKnown RBP3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 GAL3ST3Q96A11 431 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 DACT3Q96B18 629 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 ANAPC16Q96DE5 110 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 TMEM87BQ96K49 555 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 TEPSINQ96N21 525 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 NT5C1AQ9BXI3 368 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PLAAQ9Y263 795 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 PCDHA11Q9Y5I1 949 aa3.99□□□□□ -1.77
TRAPPC4-207ENST00000526141 ZC3H12DA2A288 527 aaKnown RBP3.98□□□□□ -1.77
TRAPPC4-207ENST00000526141 SLC22A31A6NKX4 558 aa3.98□□□□□ -1.77
TRAPPC4-207ENST00000526141 N4BP3O15049 544 aa3.98□□□□□ -1.77
TRAPPC4-207ENST00000526141 MAFGO15525 162 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms