RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CCNI2Q6ZMN8 369 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-202ENST00000524773 TMC4Q7Z404 712 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 TSEN2Q8NCE0 465 aaKnown RBP14.75□□□□□ -0.05
CAPN1-202ENST00000524773 TNFRSF25Q93038 417 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 TMEM60Q9H2L4 133 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 ACBD3Q9H3P7 528 aa14.75□□□□□ -0.05
CAPN1-202ENST00000524773 EPHB6O15197 1021 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 GTPBP6O43824 516 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-202ENST00000524773 IRAK1P51617 712 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 TROAPQ12815 778 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 BCAS4Q8TDM0 211 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 MS4A14Q96JA4 679 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 EFCC1Q9HA90 598 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 FCER1AP12319 257 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 TRIM28Q13263 835 aaKnown RBP14.74□□□□□ -0.05
CAPN1-202ENST00000524773 PTPROQ16827 1216 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 PROCA1Q8NCQ7 364 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-202ENST00000524773 FAM76AQ8TAV0 307 aa14.74□□□□□ -0.05
CAPN1-202ENST00000524773 MKRN1Q9UHC7 482 aaKnown RBP14.74□□□□□ -0.05
CAPN1-202ENST00000524773 USP17L12C9JPN9 530 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 USP17L21D6R901 530 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 PDE8AO60658 829 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 RPS6KA5O75582 802 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 GNGT1P63211 74 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 IRX3P78415 501 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-202ENST00000524773 NAALADL2Q58DX5 795 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 HAUS4Q9H6D7 363 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 FAM207AQ9NSI2 230 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-202ENST00000524773 LOC102724159A0A0B4J2E5 919 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 MAGEB6P1A0A0J9YX57 407 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 LGALS16A8MUM7 142 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 SEMA3EO15041 775 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 TBC1D8BQ0IIM8 1120 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 PDCLQ13371 301 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 PWP2Q15269 919 aaKnown RBP14.73□□□□□ -0.05
CAPN1-202ENST00000524773 CCDC178Q5BJE1 867 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 TUBGCP2Q9BSJ2 902 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 PRPF3O43395 683 aaKnown RBP14.73□□□□□ -0.05
CAPN1-202ENST00000524773 ZEB2O60315 1214 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 AARSP49588 968 aaKnown RBP eCLIP14.73□□□□□ -0.05
CAPN1-202ENST00000524773 SUSD4Q5VX71 490 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 CSGALNACT2Q8N6G5 542 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 CCDC155Q8N6L0 562 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 ZNF512BQ96KM6 892 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-202ENST00000524773 UIMC1Q96RL1 719 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 BRMS1Q9HCU9 246 aa14.73□□□□□ -0.05
CAPN1-202ENST00000524773 MYH2Q9UKX2 1941 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 BUB1O43683 1085 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 STARD3NLO95772 234 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 KRT14P02533 472 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 APBA1Q02410 837 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 TRADDQ15628 312 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 ENOX2Q16206 610 aaKnown RBP14.72□□□□□ -0.05
CAPN1-202ENST00000524773 ADSSL1Q8N142 457 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 ZNF507Q8TCN5 953 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 DNAJC7Q99615 494 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 MYO1AQ9UBC5 1043 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 FAM169AQ9Y6X4 670 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 LRP6O75581 1613 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 LTBP4Q8N2S1 1624 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 TUBB2AQ13885 445 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-202ENST00000524773 PAPD7Q5XG87 772 aaKnown RBP14.72□□□□□ -0.05
CAPN1-202ENST00000524773 TADA2BQ86TJ2 420 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 DZIP3Q86Y13 1208 aaKnown RBP14.72□□□□□ -0.05
CAPN1-202ENST00000524773 TMTC2Q8N394 836 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 STAG2Q8N3U4 1231 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 PPM1EQ8WY54 764 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 TUBB2BQ9BVA1 445 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 FAM107BQ9H098 131 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 SALL4Q9UJQ4 1053 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 CAPN11Q9UMQ6 739 aa14.72□□□□□ -0.05
CAPN1-202ENST00000524773 CNTNAP5Q8WYK1 1306 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 KRT86O43790 486 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 MTIF2P46199 727 aaKnown RBP14.71□□□□□ -0.05
CAPN1-202ENST00000524773 STK4Q13043 487 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 INF2Q27J81 1249 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 ANKRD40Q6AI12 368 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 TMTC3Q6ZXV5 915 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 RNF41Q9H4P4 317 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-202ENST00000524773 MYH13Q9UKX3 1938 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 SPAG1Q07617 926 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 MAP9Q49MG5 647 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 SMIM5Q71RC9 77 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 CREG2Q8IUH2 290 aa14.71□□□□□ -0.05
CAPN1-202ENST00000524773 DUSP9Q99956 384 aaKnown RBP14.71□□□□□ -0.05
CAPN1-202ENST00000524773 MAGEC2Q9UBF1 373 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-202ENST00000524773 ANKRD18AQ8IVF6 992 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 AHDC1Q5TGY3 1603 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-202ENST00000524773 MYH6P13533 1939 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 NAP1L1P55209 391 aaKnown RBP14.7□□□□□ -0.06
CAPN1-202ENST00000524773 TTMPQ5BVD1 217 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 DNAAF5Q86Y56 855 aa14.7□□□□□ -0.06
CAPN1-202ENST00000524773 CTCFLQ8NI51 663 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-202ENST00000524773 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
CAPN1-202ENST00000524773 CNOT6LQ96LI5 555 aaKnown RBP14.7□□□□□ -0.06
CAPN1-202ENST00000524773 CAPS2Q9BXY5 557 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms