RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 PPP1R2P41236 205 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 ORC2Q13416 577 aaPredicted RBP10.03□□□□□ -0.8
PKP3-202ENST00000524646 SLC35G1Q2M3R5 365 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 KRT25Q7Z3Z0 450 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 HEATR3Q7Z4Q2 680 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 CERS3Q8IU89 383 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
PKP3-202ENST00000524646 ATRIPQ8WXE1 791 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 CCDC47Q96A33 483 aaKnown RBP10.03□□□□□ -0.8
PKP3-202ENST00000524646 TRIM47Q96LD4 638 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 AK8Q96MA6 479 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 SETDB2Q96T68 719 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 DNAJC7Q99615 494 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 SPZ1Q9BXG8 430 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 IL17RBQ9NRM6 502 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 BARHL2Q9NY43 387 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 MAGEC2Q9UBF1 373 aaPredicted RBP10.03□□□□□ -0.8
PKP3-202ENST00000524646 SRP68Q9UHB9 627 aaKnown RBP10.03□□□□□ -0.8
PKP3-202ENST00000524646 MAD2L2Q9UI95 211 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 RAB21Q9UL25 225 aa10.03□□□□□ -0.8
PKP3-202ENST00000524646 ANKRD31Q8N7Z5 1873 aa10.02□□□□□ -0.8
PKP3-202ENST00000524646 NRXN2Q9P2S2 1712 aa10.02□□□□□ -0.8
PKP3-202ENST00000524646 PALM3A6NDB9 673 aaPredicted RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 TRIM49BA6NDI0 452 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 COBLO75128 1261 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 ERLIN1O75477 346 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 TSPY3P0CV98 308 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 TSPY8P0CW00 308 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 VEGFAP15692 232 aaPredicted RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 CDC25AP30304 524 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 UBA7P41226 1012 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 PPP4CP60510 307 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 AMPD2Q01433 879 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 UBXN1Q04323 297 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 INF2Q27J81 1249 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 TTI2Q6NXR4 508 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 C15orf52Q6ZUT6 534 aaKnown RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 IRF2BP1Q8IU81 584 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 FAM114A1Q8IWE2 563 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 STAG2Q8N3U4 1231 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 MSL3Q8N5Y2 521 aaKnown RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 MB21D1Q8N884 522 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 GIMAP8Q8ND71 665 aaPredicted RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 HNRNPLLQ8WVV9 542 aaKnown RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 DHTKD1Q96HY7 919 aaPredicted RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 SLF1Q9BQI6 1058 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 FUT8Q9BYC5 575 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 GBP3Q9H0R5 595 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 EPC1Q9H2F5 836 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 ANKZF1Q9H8Y5 726 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 KBTBD4Q9NVX7 518 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 LEMD3Q9Y2U8 911 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 REXO2Q9Y3B8 237 aaKnown RBP10.02□□□□□ -0.81
PKP3-202ENST00000524646 SIPA1L1O43166 1804 aa10.02□□□□□ -0.81
PKP3-202ENST00000524646 ESYT2A0FGR8 921 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 BICDL2A1A5D9 508 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 CTAGE15A4D2H0 777 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 PP2D1A8MPX8 630 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 RNF225M0QZC1 329 aaPredicted RBP10.01□□□□□ -0.81
PKP3-202ENST00000524646 MAP2K7O14733 419 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 GNPATO15228 680 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 NDUFA10O95299 355 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 BAG3O95817 575 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 TUBBP07437 444 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 LDHCP07864 332 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 CTAGE8P0CG41 777 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 SRGNP10124 158 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 PLCG1P19174 1290 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 RASA1P20936 1047 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 DNM2P50570 870 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 PIP4K2BP78356 416 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 GRAPQ13588 217 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 SMC1AQ14683 1233 aaKnown RBP10.01□□□□□ -0.81
PKP3-202ENST00000524646 NONOQ15233 471 aaKnown RBP eCLIP10.01□□□□□ -0.81
PKP3-202ENST00000524646 COBLL1Q53SF7 1204 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 ZNF662Q6ZS27 426 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 ZNF804AQ7Z570 1209 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 CTAGE6Q86UF2 777 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 CABP7Q86V35 215 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 TXNRD3Q86VQ6 643 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 CTAGE4Q8IX94 777 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 EHBP1Q8NDI1 1231 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 OR8K1Q8NGG5 319 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 GRAPLQ8TC17 118 aaPredicted RBP10.01□□□□□ -0.81
PKP3-202ENST00000524646 ZNF507Q8TCN5 953 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 DYNLL2Q96FJ2 89 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 RTFDC1Q9BY42 306 aaPredicted RBP10.01□□□□□ -0.81
PKP3-202ENST00000524646 HAUS4Q9H6D7 363 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 ZNF287Q9HBT7 754 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 EXOC1Q9NV70 894 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 PUF60Q9UHX1 559 aaKnown RBP10.01□□□□□ -0.81
PKP3-202ENST00000524646 CAPN11Q9UMQ6 739 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 JAG2Q9Y219 1238 aa10.01□□□□□ -0.81
PKP3-202ENST00000524646 ZNF646O15015 1829 aaPredicted RBP10□□□□□ -0.81
PKP3-202ENST00000524646 TTC26A0AVF1 554 aa10□□□□□ -0.81
PKP3-202ENST00000524646 USP17L3A6NCW0 530 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms