RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 BRD3Q15059 726 aa12.46□□□□□ -0.42
HDAC9-228ENST00000524023 AMOTL1Q8IY63 956 aa12.46□□□□□ -0.42
HDAC9-228ENST00000524023 ZNF444Q8N0Y2 327 aaPredicted RBP12.46□□□□□ -0.42
HDAC9-228ENST00000524023 MB21D1Q8N884 522 aa12.46□□□□□ -0.42
HDAC9-228ENST00000524023 NAPGQ99747 312 aaPredicted RBP12.46□□□□□ -0.42
HDAC9-228ENST00000524023 SLF1Q9BQI6 1058 aa12.46□□□□□ -0.42
HDAC9-228ENST00000524023 TMEM47Q9BQJ4 181 aa12.46□□□□□ -0.42
HDAC9-228ENST00000524023 THAP9Q9H5L6 903 aa12.46□□□□□ -0.42
HDAC9-228ENST00000524023 ANKZF1Q9H8Y5 726 aa12.46□□□□□ -0.42
HDAC9-228ENST00000524023 A0A1W2PQC6 194 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 LGALS16A8MUM7 142 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 BAG3O95817 575 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 PRPHP41219 470 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 PPP4CP60510 307 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 SEMA3FQ13275 785 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 STIM1Q13586 685 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
HDAC9-228ENST00000524023 LONRF2Q1L5Z9 754 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 PTF1AQ7RTS3 328 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 GIMAP8Q8ND71 665 aaPredicted RBP12.45□□□□□ -0.42
HDAC9-228ENST00000524023 ZNF507Q8TCN5 953 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 LRRC15Q8TF66 581 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 PLIN2Q99541 437 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 CHP1Q99653 195 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 MTMR7Q9Y216 660 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 GNPATO15228 680 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 CYP2C19P33261 490 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 TUBB4BP68371 445 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 GSTO1P78417 241 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 SMC1AQ14683 1233 aaKnown RBP12.45□□□□□ -0.42
HDAC9-228ENST00000524023 GRIK5Q16478 980 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 MSANTD4Q8NCY6 345 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 OR8K1Q8NGG5 319 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 LZTS2Q9BRK4 669 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 ANKIB1Q9P2G1 1089 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 STX8Q9UNK0 236 aa12.45□□□□□ -0.42
HDAC9-228ENST00000524023 EPN1Q9Y6I3 576 aaPredicted RBP12.45□□□□□ -0.42
HDAC9-228ENST00000524023 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
HDAC9-228ENST00000524023 CDK5RAP2Q96SN8 1893 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 PSMA7O14818 248 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 POLR3GO15318 223 aaPredicted RBP12.44□□□□□ -0.42
HDAC9-228ENST00000524023 NDUFA10O95299 355 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 RASA1P20936 1047 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 WHAMMP3Q1A5X7 153 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 SLC51AQ86UW1 340 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 HNRNPLLQ8WVV9 542 aaKnown RBP12.44□□□□□ -0.42
HDAC9-228ENST00000524023 TRIM47Q96LD4 638 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 DNAJC7Q99615 494 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 CUEDC2Q9H467 287 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 RAB21Q9UL25 225 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 LEMD3Q9Y2U8 911 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
HDAC9-228ENST00000524023 REXO2Q9Y3B8 237 aaKnown RBP12.44□□□□□ -0.42
HDAC9-228ENST00000524023 FLT1P17948 1338 aa12.44□□□□□ -0.42
HDAC9-228ENST00000524023 TFRCP02786 760 aaKnown RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 GOLGA8HP0CJ92 632 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 TTI2Q6NXR4 508 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 MAGEF1Q9HAY2 307 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 CAPN11Q9UMQ6 739 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 PES1O00541 588 aaKnown RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 MAP2K7O14733 419 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 PIP4K2BP78356 416 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 AMPD2Q01433 879 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 CABP7Q86V35 215 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 AMIGO3Q86WK7 504 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 NOC3LQ8WTT2 800 aaKnown RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 DHTKD1Q96HY7 919 aaPredicted RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 AK8Q96MA6 479 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 PNKPQ96T60 521 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 DUSP9Q99956 384 aaKnown RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 SPZ1Q9BXG8 430 aa12.43□□□□□ -0.42
HDAC9-228ENST00000524023 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
HDAC9-228ENST00000524023 CCDC66A2RUB6 948 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 CTAGE15A4D2H0 777 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 ERICH4A6NGS2 130 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 LDHCP07864 332 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 OR52Z1P0C646 297 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 CTAGE8P0CG41 777 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 PLCG1P19174 1290 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 DNM2P50570 870 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 NAPAP54920 295 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 GRAPQ13588 217 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 NFIXQ14938 502 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 BEND6Q5SZJ8 279 aaPredicted RBP12.42□□□□□ -0.42
HDAC9-228ENST00000524023 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 KRT25Q7Z3Z0 450 aa12.42□□□□□ -0.42
HDAC9-228ENST00000524023 CTAGE6Q86UF2 777 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms