RNA–Protein interactions for RNA: ENST00000523663.5

ITGB2-223, Transcript of integrin subunit beta 2, human

TSL 5

Gene ITGB2, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB2-223	ENST00000523663	EVC	P57679	992 aa		18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	ANKRD1	Q15327	319 aa		18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	WDR78	Q5VTH9	848 aa		18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	SNRNP48	Q6IEG0	339 aa	Known RBP	18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	TRIM47	Q96LD4	638 aa		18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	LZTS2	Q9BRK4	669 aa		18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	LARP6	Q9BRS8	491 aa	Known RBP	18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	CWC22	Q9HCG8	908 aa	Known RBP	18.27	■□□□□ 0.52
ITGB2-223	ENST00000523663	TNPO2	O14787	897 aa	Known RBP	18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	ATP2A1	O14983	1001 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	PLEKHA8P1	O95397	391 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	CTGF	P29279	349 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	METAP2	P50579	478 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	AK2	P54819	239 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	RABEP1	Q15276	862 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	NCAPG2	Q86XI2	1143 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	RIOX2	Q8IUF8	465 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	JMJD4	Q9H9V9	463 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	EFCC1	Q9HA90	598 aa		18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	RBM28	Q9NW13	759 aa	Known RBP	18.26	■□□□□ 0.51
ITGB2-223	ENST00000523663	ZNF536	O15090	1300 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	SLC25A27	O95847	323 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	ERCC3	P19447	782 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	PDIA3	P30101	505 aa	Known RBP	18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	COPB2	P35606	906 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	CAP1	Q01518	475 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	CDC37	Q16543	378 aa	Predicted RBP	18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	SLC35G1	Q2M3R5	365 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	TMTC3	Q6ZXV5	915 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	NBPF11	Q86T75	865 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	SHCBP1	Q8NEM2	672 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	COA7	Q96BR5	231 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	AGBL1	Q96MI9	1066 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	MROH8	Q9H579	483 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	CCPG1	Q9ULG6	757 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	HPS5	Q9UPZ3	1129 aa		18.25	■□□□□ 0.51
ITGB2-223	ENST00000523663	CCDC196	A0A1B0GTZ2	297 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	CYTH3	O43739	400 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	GNRH1	P01148	92 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	ICAM1	P05362	532 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	PPP2R5B	Q15173	497 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	NOL8	Q76FK4	1167 aa	Known RBP	18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	GPR142	Q7Z601	462 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	CMTR1	Q8N1G2	835 aa	Known RBP	18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	SRBD1	Q8N5C6	995 aa	Known RBP	18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	ZNF274	Q96GC6	653 aa	Predicted RBP	18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	SPZ1	Q9BXG8	430 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	RIOX1	Q9H6W3	641 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	PNMA2	Q9UL42	364 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	RIPK3	Q9Y572	518 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	TRIM17	Q9Y577	477 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	IVNS1ABP	Q9Y6Y0	642 aa		18.24	■□□□□ 0.51
ITGB2-223	ENST00000523663	NID2	Q14112	1375 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	SMARCA1	P28370	1054 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	CDC27	P30260	824 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	QRICH1	Q2TAL8	776 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	OTOP1	Q7RTM1	612 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	PLEKHH3	Q7Z736	793 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	CTU1	Q7Z7A3	348 aa	Known RBP	18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	HOMER1	Q86YM7	354 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	CCDC82	Q8N4S0	544 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	PIBF1	Q8WXW3	757 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	PIGS	Q96S52	555 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	HOMER2	Q9NSB8	354 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	TPCN1	Q9ULQ1	816 aa		18.23	■□□□□ 0.51
ITGB2-223	ENST00000523663	PLXNA1	Q9UIW2	1896 aa		18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	ZBTB5	O15062	677 aa		18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	ALAS1	P13196	640 aa		18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	HOXD10	P28358	340 aa		18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	ADD1	P35611	737 aa	Known RBP	18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	CCT2	P78371	535 aa	Known RBP	18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	STK3	Q13188	491 aa		18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	MTMR8	Q96EF0	704 aa		18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	RRP36	Q96EU6	259 aa	Known RBP	18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	NCOA5	Q9HCD5	579 aa	Known RBP	18.22	■□□□□ 0.51
ITGB2-223	ENST00000523663	TAL1	P17542	331 aa	Predicted RBP	18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	TKFC	Q3LXA3	575 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	USH1G	Q495M9	461 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	FBXO11	Q86XK2	927 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	CHST13	Q8NET6	341 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	TRERF1	Q96PN7	1200 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	RNF146	Q9NTX7	359 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	SEC63	Q9UGP8	760 aa	Known RBP	18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	SRRD	Q9UH36	339 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	FBXO40	Q9UH90	709 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	ZNF236	Q9UL36	1845 aa		18.21	■□□□□ 0.51
ITGB2-223	ENST00000523663	PNMA6F	A0A0J9YX94	578 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	STRN	O43815	780 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	ST18	O60284	1047 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	FCER1A	P12319	257 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	PTPRE	P23469	700 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	PRKCZ	Q05513	592 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	SOCS4	Q8WXH5	440 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	MMP19	Q99542	508 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	AMN	Q9BXJ7	453 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	SLK	Q9H2G2	1235 aa	Predicted RBP	18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	ACAD9	Q9H845	621 aa		18.2	■□□□□ 0.5
ITGB2-223	ENST00000523663	CNTNAP5	Q8WYK1	1306 aa		18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms