RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CCDC85CA6NKD9 419 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 KCNH1O95259 989 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 ITGAVP06756 1048 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 CD3EP07766 207 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 ZGLP1P0C6A0 271 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 GDNFP39905 211 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 RASA3Q14644 834 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 TRIM59Q8IWR1 403 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 MRGPRX3Q96LB0 322 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 FCRL3Q96P31 734 aaPredicted RBP9.02□□□□□ -0.97
CPNE3-206ENST00000523469 CDADC1Q9BWV3 514 aa9.02□□□□□ -0.97
CPNE3-206ENST00000523469 VAMP4O75379 141 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 GSTM1P09488 218 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 ZNF227Q86WZ6 799 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 LINC01599Q8WXQ3 324 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 SGSM3Q96HU1 749 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 SRPK1Q96SB4 655 aaKnown RBP9.01□□□□□ -0.97
CPNE3-206ENST00000523469 LNPKQ9C0E8 428 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 AP5S1Q9NUS5 200 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 SNTG2Q9NY99 539 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 ZMYM5Q9UJ78 669 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
CPNE3-206ENST00000523469 AURKAO14965 403 aa9□□□□□ -0.97
CPNE3-206ENST00000523469 HK2P52789 917 aa9□□□□□ -0.97
CPNE3-206ENST00000523469 NFE2L2Q16236 605 aa9□□□□□ -0.97
CPNE3-206ENST00000523469 MTERF2Q49AM1 385 aa9□□□□□ -0.97
CPNE3-206ENST00000523469 ZPBP2Q6X784 338 aa9□□□□□ -0.97
CPNE3-206ENST00000523469 FCRL2Q96LA5 508 aaPredicted RBP9□□□□□ -0.97
CPNE3-206ENST00000523469 G6PC3Q9BUM1 346 aa9□□□□□ -0.97
CPNE3-206ENST00000523469 IFNGR1P15260 489 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 IFRD2Q12894 506 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-206ENST00000523469 DPY19L1Q2PZI1 675 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 GTF2IRD2BQ6EKJ0 949 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 ATG4DQ86TL0 474 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-206ENST00000523469 GTF2IRD2Q86UP8 949 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 OXR1Q8N573 874 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 ANKS4BQ8N8V4 417 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 PDZD8Q8NEN9 1154 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 FLAD1Q8NFF5 587 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 MAP6Q96JE9 813 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 MCMBPQ9BTE3 642 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 LGR4Q9BXB1 951 aa8.99□□□□□ -0.97
CPNE3-206ENST00000523469 GPR55Q9Y2T6 319 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-206ENST00000523469 FAM221BA6H8Z2 402 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 STXBP3O00186 592 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 KIR2DL1P43626 348 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-206ENST00000523469 KIR2DL2P43627 348 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-206ENST00000523469 IRAK1P51617 712 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 CHRNEQ04844 493 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 EEF1DP3Q658K8 133 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 RCSD1Q6JBY9 416 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 SPPL2CQ8IUH8 684 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 LRRC47Q8N1G4 583 aaKnown RBP8.98□□□□□ -0.97
CPNE3-206ENST00000523469 NKX2-4Q9H2Z4 354 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 ZSWIM4Q9H7M6 989 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 CYP26B1Q9NR63 512 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 ERVK13-1Q9NX77 482 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 TNFRSF10DQ9UBN6 386 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 EBF1Q9UH73 591 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
CPNE3-206ENST00000523469 A0A1W2PQU0 124 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 FITM1A5D6W6 292 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 FGF10O15520 208 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-206ENST00000523469 TBX1O43435 398 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 HPXP02790 462 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 RAC2P15153 192 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 AFMP43652 599 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 SPATC1Q76KD6 591 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 DPH6Q7L8W6 267 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 NAT16Q8N8M0 369 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 BTN2A2Q8WVV5 523 aa8.97□□□□□ -0.97
CPNE3-206ENST00000523469 CDK11AQ9UQ88 783 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-206ENST00000523469 C2orf71A6NGG8 1288 aa8.96□□□□□ -0.98
CPNE3-206ENST00000523469 BIN1O00499 593 aa8.96□□□□□ -0.98
CPNE3-206ENST00000523469 HOXC12P31275 282 aa8.96□□□□□ -0.98
CPNE3-206ENST00000523469 PPP2R2AP63151 447 aa8.96□□□□□ -0.98
CPNE3-206ENST00000523469 HSP90AA2PQ14568 343 aaPredicted RBP8.96□□□□□ -0.98
CPNE3-206ENST00000523469 BMS1Q14692 1282 aaKnown RBP8.96□□□□□ -0.98
CPNE3-206ENST00000523469 CYP2R1Q6VVX0 501 aa8.96□□□□□ -0.98
CPNE3-206ENST00000523469 HHIPL1Q96JK4 782 aa8.96□□□□□ -0.98
CPNE3-206ENST00000523469 CCDC140Q96MF4 163 aa8.96□□□□□ -0.98
CPNE3-206ENST00000523469 CAPNS1P04632 268 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 SEPHS1P49903 392 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 SSRP1Q08945 709 aaKnown RBP8.95□□□□□ -0.98
CPNE3-206ENST00000523469 NR0B2Q15466 257 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 KSR1Q8IVT5 923 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 COPS5Q92905 334 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 MRFAP1L1Q96HT8 127 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 PTCHD1Q96NR3 888 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 SPATA9Q9BWV2 254 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 PFDN2Q9UHV9 154 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 CUX2O14529 1486 aa8.95□□□□□ -0.98
CPNE3-206ENST00000523469 EIF4G1Q04637 1599 aaKnown RBP8.95□□□□□ -0.98
CPNE3-206ENST00000523469 FADS2P1A8MWK0 482 aa8.94□□□□□ -0.98
CPNE3-206ENST00000523469 TBC1D8O95759 1140 aa8.94□□□□□ -0.98
CPNE3-206ENST00000523469 SCRN1Q12765 414 aa8.94□□□□□ -0.98
CPNE3-206ENST00000523469 HLA-DQA1Q5Y7H0 255 aa8.94□□□□□ -0.98
CPNE3-206ENST00000523469 LILRA2Q8N149 483 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms