RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 ZSWIM5Q9P217 1185 aa9.64□□□□□ -0.87
NUDCD1-204ENST00000521439 H0Y8X5 98 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 H3BS24 57 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 TPP2P29144 1249 aaPredicted RBP9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 GRIA2P42262 883 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 CWF19L1Q69YN2 538 aaKnown RBP9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 GTF2IRD2BQ6EKJ0 949 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 GTF2IRD2Q86UP8 949 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 ABI1Q8IZP0 508 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 BTN2A2Q8WVV5 523 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 UBE2FQ969M7 185 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 TCTN2Q96GX1 697 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 CDC6Q99741 560 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 SEMA3GQ9NS98 782 aa9.63□□□□□ -0.87
NUDCD1-204ENST00000521439 CCDC163A0A0D9SF12 145 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 VAMP4O75379 141 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 FGFR1P11362 822 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 AMPD2Q01433 879 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 POU4F1Q01851 419 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 AOC3Q16853 763 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 PLEKHG4Q58EX7 1191 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 FOXB2Q5VYV0 432 aa9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 IPO9Q96P70 1041 aaKnown RBP9.62□□□□□ -0.87
NUDCD1-204ENST00000521439 WASH4PA8MWX3 477 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 HOXC12P31275 282 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 BMP8BP34820 402 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 BNIP3Q12983 259 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 YOD1Q5VVQ6 348 aaPredicted RBP9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 CRTC3Q6UUV7 619 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 ZNF574Q6ZN55 896 aaPredicted RBP9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 C16orf86Q6ZW13 317 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 WFDC3Q8IUB2 231 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 SCUBE1Q8IWY4 988 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 CCDC140Q96MF4 163 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 DHRS4Q9BTZ2 278 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 NKX2-4Q9H2Z4 354 aa9.61□□□□□ -0.87
NUDCD1-204ENST00000521439 PRODHO43272 600 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 PABPC1P11940 636 aaKnown RBP9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 L1CAMP32004 1257 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 NOP2P46087 812 aaKnown RBP9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 GAB4Q2WGN9 574 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 FAM209AQ5JX71 171 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 NSMFQ6X4W1 530 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 SPRED2Q7Z698 418 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 SYNPOQ8N3V7 929 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 USHBP1Q8N6Y0 703 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 ASB11Q8WXH4 323 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 KISS1RQ969F8 398 aaPredicted RBP9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 EXOC2Q96KP1 924 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 IER2Q9BTL4 223 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 CYP26B1Q9NR63 512 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 ADGRE2Q9UHX3 823 aa9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 GPR55Q9Y2T6 319 aaPredicted RBP9.6□□□□□ -0.87
NUDCD1-204ENST00000521439 PITPNM2Q9BZ72 1349 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 TRBV23-1A0A0A0MS06 115 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 CD8BP10966 210 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 DPY19L1Q2PZI1 675 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 MCTP1Q6DN14 999 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 TMPRSS7Q7RTY8 843 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 OSBP2Q969R2 916 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 DUSP13Q9UII6 198 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
NUDCD1-204ENST00000521439 ASMTLO95671 621 aa9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 CD3EP07766 207 aa9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 VAV1P15498 845 aa9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 PCBP3P57721 371 aaKnown RBP9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 PLCL1Q15111 1095 aa9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 TCEA2Q15560 299 aa9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 SF1Q15637 639 aaKnown RBP9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 FCRL3Q96P31 734 aaPredicted RBP9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 MCMBPQ9BTE3 642 aa9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 MRPS23Q9Y3D9 190 aaKnown RBP9.58□□□□□ -0.88
NUDCD1-204ENST00000521439 SSU72P8A0A1W2PR75 194 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 SCG5P05408 212 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 SYPP08247 313 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 SNRPB2P08579 225 aaKnown RBP9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 GFRA1P56159 465 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 ANGEL2Q5VTE6 544 aaKnown RBP9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 ZNF662Q6ZS27 426 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 KIAA0907Q7Z7F0 614 aaPredicted RBP9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 KCTD13Q8WZ19 329 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 SLC12A9Q9BXP2 914 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 ATP13A1Q9HD20 1204 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 TCFL5Q9UL49 500 aa9.57□□□□□ -0.88
NUDCD1-204ENST00000521439 AURKAO14965 403 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 DLX3O60479 287 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 ZNF205O95201 554 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 CPP00450 1065 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 FUT4P22083 530 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 KCNJ6P48051 423 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 SUMO1P63165 101 aaKnown RBP9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 MAP4K2Q12851 820 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 RNF111Q6ZNA4 994 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 CREG2Q8IUH2 290 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 FEZ1Q99689 392 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 FOXP3Q9BZS1 431 aa9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUDCD1-204ENST00000521439 DNAJC25-GNG10A0A024R161 153 aa9.55□□□□□ -0.88
NUDCD1-204ENST00000521439 STXBP3O00186 592 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms