RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 KDM2BQ8NHM5 1336 aa7.74□□□□□ -1.17
SKP1-208ENST00000521216 DNAJC25-GNG10A0A024R161 153 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 A0A1W2PQU0 124 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
SKP1-208ENST00000521216 ZNF205O95201 554 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 IFNGR1P15260 489 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 GRB10Q13322 594 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 RALGPS1Q5JS13 557 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 GTF2IRD2BQ6EKJ0 949 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 SLC23A3Q6PIS1 610 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 GTF2IRD2Q86UP8 949 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 TRIM59Q8IWR1 403 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
SKP1-208ENST00000521216 NAT16Q8N8M0 369 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 MRGPRX3Q96LB0 322 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 FCRL3Q96P31 734 aaPredicted RBP7.73□□□□□ -1.17
SKP1-208ENST00000521216 MCMBPQ9BTE3 642 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 SPATA9Q9BWV2 254 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 SLC12A9Q9BXP2 914 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 ADAMTS10Q9H324 1103 aa7.73□□□□□ -1.17
SKP1-208ENST00000521216 KCNJ6P48051 423 aa7.72□□□□□ -1.17
SKP1-208ENST00000521216 HK2P52789 917 aa7.72□□□□□ -1.17
SKP1-208ENST00000521216 GP2P55259 537 aaKnown RBP7.72□□□□□ -1.17
SKP1-208ENST00000521216 PPP2R2AP63151 447 aa7.72□□□□□ -1.17
SKP1-208ENST00000521216 HSP90AA2PQ14568 343 aaPredicted RBP7.72□□□□□ -1.17
SKP1-208ENST00000521216 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
SKP1-208ENST00000521216 TMEM82A0PJX8 343 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 C2orf71A6NGG8 1288 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.18
SKP1-208ENST00000521216 ECI1P42126 302 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 GRIA2P42262 883 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 SEPHS1P49903 392 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 SCRN1Q12765 414 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 ABI1Q8IZP0 508 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 SGSM3Q96HU1 749 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 MBNL3Q9NUK0 354 aaKnown RBP7.71□□□□□ -1.18
SKP1-208ENST00000521216 ADAMTS6Q9UKP5 1117 aa7.71□□□□□ -1.18
SKP1-208ENST00000521216 AURKAO14965 403 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 RNASE1P07998 156 aaKnown RBP7.7□□□□□ -1.18
SKP1-208ENST00000521216 SF1Q15637 639 aaKnown RBP7.7□□□□□ -1.18
SKP1-208ENST00000521216 ZNF792Q3KQV3 632 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 RTP2Q5QGT7 225 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 LILRB2Q8N423 598 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 ZNF669Q96BR6 464 aaPredicted RBP7.7□□□□□ -1.18
SKP1-208ENST00000521216 CDC6Q99741 560 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 AARSD1Q9BTE6 412 aaKnown RBP7.7□□□□□ -1.18
SKP1-208ENST00000521216 NKX2-4Q9H2Z4 354 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 RC3H2Q9HBD1 1191 aaKnown RBP7.7□□□□□ -1.18
SKP1-208ENST00000521216 GPRC5CQ9NQ84 441 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 TMEM59LQ9UK28 342 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 BACE2Q9Y5Z0 518 aa7.7□□□□□ -1.18
SKP1-208ENST00000521216 TRAV20A0A0B4J274 112 aa7.69□□□□□ -1.18
SKP1-208ENST00000521216 PRODHO43272 600 aa7.69□□□□□ -1.18
SKP1-208ENST00000521216 ENDOUP21128 410 aaKnown RBP7.69□□□□□ -1.18
SKP1-208ENST00000521216 DUSP4Q13115 394 aa7.69□□□□□ -1.18
SKP1-208ENST00000521216 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
SKP1-208ENST00000521216 IPO9Q96P70 1041 aaKnown RBP7.69□□□□□ -1.18
SKP1-208ENST00000521216 IER2Q9BTL4 223 aa7.69□□□□□ -1.18
SKP1-208ENST00000521216 CYP26B1Q9NR63 512 aa7.69□□□□□ -1.18
SKP1-208ENST00000521216 ZGLP1P0C6A0 271 aa7.68□□□□□ -1.18
SKP1-208ENST00000521216 FAM153BP0C7A2 387 aa7.68□□□□□ -1.18
SKP1-208ENST00000521216 HOXC12P31275 282 aa7.68□□□□□ -1.18
SKP1-208ENST00000521216 YOD1Q5VVQ6 348 aaPredicted RBP7.68□□□□□ -1.18
SKP1-208ENST00000521216 Q8N3U1 123 aa7.68□□□□□ -1.18
SKP1-208ENST00000521216 CCDC120Q96HB5 630 aa7.68□□□□□ -1.18
SKP1-208ENST00000521216 ARHGEF4Q9NR80 690 aa7.68□□□□□ -1.18
SKP1-208ENST00000521216 OAS3Q9Y6K5 1087 aaKnown RBP7.68□□□□□ -1.18
SKP1-208ENST00000521216 USP2O75604 605 aaPredicted RBP7.67□□□□□ -1.18
SKP1-208ENST00000521216 PRSS53Q2L4Q9 553 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 NSMFQ6X4W1 530 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 NOP9Q86U38 636 aaKnown RBP7.67□□□□□ -1.18
SKP1-208ENST00000521216 ZBTB38Q8NAP3 1195 aaPredicted RBP7.67□□□□□ -1.18
SKP1-208ENST00000521216 FCRL2Q96LA5 508 aaPredicted RBP7.67□□□□□ -1.18
SKP1-208ENST00000521216 CCDC140Q96MF4 163 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 PTCHD1Q96NR3 888 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 ERVK13-1Q9NX77 482 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 CLEC1BQ9P126 229 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 EBF1Q9UH73 591 aa7.67□□□□□ -1.18
SKP1-208ENST00000521216 FGF10O15520 208 aaPredicted RBP7.66□□□□□ -1.18
SKP1-208ENST00000521216 ADCY3O60266 1144 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 TBC1D8O95759 1140 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 THBDP07204 575 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 LAPTM5Q13571 262 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 SLC14A2Q15849 920 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 RCSD1Q6JBY9 416 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 CEP128Q6ZU80 1094 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 JAMLQ86YT9 394 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 OXR1Q8N573 874 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 THAP3Q8WTV1 239 aaPredicted RBP7.66□□□□□ -1.18
SKP1-208ENST00000521216 MAP6Q96JE9 813 aa7.66□□□□□ -1.18
SKP1-208ENST00000521216 PABPC1P11940 636 aaKnown RBP7.65□□□□□ -1.18
SKP1-208ENST00000521216 PLS3P13797 630 aa7.65□□□□□ -1.18
SKP1-208ENST00000521216 L1CAMP32004 1257 aa7.65□□□□□ -1.18
SKP1-208ENST00000521216 GFRA1P56159 465 aa7.65□□□□□ -1.18
SKP1-208ENST00000521216 ERVFC1P60507 584 aa7.65□□□□□ -1.18
SKP1-208ENST00000521216 FAM209AQ5JX71 171 aa7.65□□□□□ -1.18
SKP1-208ENST00000521216 CPNE8Q86YQ8 564 aa7.65□□□□□ -1.18
SKP1-208ENST00000521216 TMEM145Q8NBT3 493 aa7.65□□□□□ -1.18
SKP1-208ENST00000521216 SH3TC2Q8TF17 1288 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms