RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 BMP8BP34820 402 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 MAGEA10P43363 369 aaPredicted RBP12.67□□□□□ -0.38
PVT1-209ENST00000520913 NT5C2P49902 561 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 LRRC41Q15345 812 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 TKFCQ3LXA3 575 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 AKNAD1Q5T1N1 836 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 MAMDC4Q6UXC1 1216 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 MFSD6Q6ZSS7 791 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 RASGRP2Q7LDG7 609 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 RNF146Q9NTX7 359 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 TCP11L1Q9NUJ3 509 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
PVT1-209ENST00000520913 ZNF536O15090 1300 aa12.66□□□□□ -0.38
PVT1-209ENST00000520913 NEDD4P46934 1319 aa12.66□□□□□ -0.38
PVT1-209ENST00000520913 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
PVT1-209ENST00000520913 ZNF865P0CJ78 1059 aaPredicted RBP12.66□□□□□ -0.38
PVT1-209ENST00000520913 TOP1P11387 765 aaKnown RBP12.66□□□□□ -0.38
PVT1-209ENST00000520913 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
PVT1-209ENST00000520913 RTP1P59025 263 aa12.66□□□□□ -0.38
PVT1-209ENST00000520913 CWC27Q6UX04 472 aaKnown RBP12.66□□□□□ -0.38
PVT1-209ENST00000520913 RNF180Q86T96 592 aa12.66□□□□□ -0.38
PVT1-209ENST00000520913 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
PVT1-209ENST00000520913 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
PVT1-209ENST00000520913 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
PVT1-209ENST00000520913 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
PVT1-209ENST00000520913 KIAA1217Q5T5P2 1943 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 ZNF213O14771 459 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 ALAS1P13196 640 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
PVT1-209ENST00000520913 SNX17Q15036 470 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 CCDC174Q6PII3 467 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 ESR2Q92731 530 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 AGBL1Q96MI9 1066 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 TMEM47Q9BQJ4 181 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 DSCC1Q9BVC3 393 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 A1CFQ9NQ94 594 aaKnown RBP12.65□□□□□ -0.38
PVT1-209ENST00000520913 PRKAG2Q9UGJ0 569 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 FAM184BQ9ULE4 1060 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 ATP11BQ9Y2G3 1177 aa12.65□□□□□ -0.38
PVT1-209ENST00000520913 RAD50Q92878 1312 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 SYNRGQ9UMZ2 1314 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 ADCYAP1R1P41586 468 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 BTNL9Q6UXG8 535 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 SLC39A5Q6ZMH5 540 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 ARMCX2Q7L311 632 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 TDHQ8IZJ6 230 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 FAM133AQ8N9E0 248 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 LENG1Q96BZ8 264 aaPredicted RBP12.64□□□□□ -0.39
PVT1-209ENST00000520913 FGD4Q96M96 766 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 UBE2OQ9C0C9 1292 aaKnown RBP12.64□□□□□ -0.39
PVT1-209ENST00000520913 RANBP17Q9H2T7 1088 aaKnown RBP12.64□□□□□ -0.39
PVT1-209ENST00000520913 ABHD16BQ9H3Z7 469 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.64□□□□□ -0.39
PVT1-209ENST00000520913 CCPG1Q9ULG6 757 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 PHF24Q9UPV7 400 aa12.64□□□□□ -0.39
PVT1-209ENST00000520913 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
PVT1-209ENST00000520913 A0A1W2PQ45 241 aaPredicted RBP12.63□□□□□ -0.39
PVT1-209ENST00000520913 A0A1W2PQY0 241 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 ADAMTS4O75173 837 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 SNAI1O95863 264 aaPredicted RBP12.63□□□□□ -0.39
PVT1-209ENST00000520913 PGK1P00558 417 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 ICAM1P05362 532 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 PDHBP11177 359 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 PDE4AP27815 886 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 ACVR2BQ13705 512 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 IMMTQ16891 758 aaKnown RBP12.63□□□□□ -0.39
PVT1-209ENST00000520913 TTC22Q5TAA0 569 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 C1orf53Q5VUE5 145 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 CCDC144CPQ8IYA2 1237 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 TTC14Q96N46 770 aa12.63□□□□□ -0.39
PVT1-209ENST00000520913 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
PVT1-209ENST00000520913 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 ASB14A6NK59 587 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 DUSP11O75319 330 aaKnown RBP12.62□□□□□ -0.39
PVT1-209ENST00000520913 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 GSPT1P15170 499 aaKnown RBP12.62□□□□□ -0.39
PVT1-209ENST00000520913 SLC16A2P36021 539 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 SNAP25P60880 206 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
PVT1-209ENST00000520913 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
PVT1-209ENST00000520913 CNTN2Q02246 1040 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 ZNF543Q08ER8 600 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 TRIM60Q495X7 471 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 MUM1L1Q5H9M0 696 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 GPATCH4Q5T3I0 446 aaKnown RBP12.62□□□□□ -0.39
PVT1-209ENST00000520913 TSEN34Q9BSV6 310 aaKnown RBP12.62□□□□□ -0.39
PVT1-209ENST00000520913 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 CYP39A1Q9NYL5 469 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 CTNNA3Q9UI47 895 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 PNMA2Q9UL42 364 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 COL6A3P12111 3177 aa12.62□□□□□ -0.39
PVT1-209ENST00000520913 SOX1O00570 391 aaPredicted RBP12.61□□□□□ -0.39
PVT1-209ENST00000520913 KDM4AO75164 1064 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms