RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 ME3Q16798 604 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.21■□□□□ 0.83
TRAM1-203ENST00000520700 PAGR1Q9BTK6 254 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 MAF1Q9H063 256 aa20.21■□□□□ 0.83
TRAM1-203ENST00000520700 SH2B1Q9NRF2 756 aaPredicted RBP20.21■□□□□ 0.83
TRAM1-203ENST00000520700 NAP1L2Q9ULW6 460 aaPredicted RBP20.21■□□□□ 0.83
TRAM1-203ENST00000520700 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
TRAM1-203ENST00000520700 PCNTO95613 3336 aa20.2■□□□□ 0.82
TRAM1-203ENST00000520700 PNMA6FA0A0J9YX94 578 aa20.2■□□□□ 0.82
TRAM1-203ENST00000520700 FOXN1O15353 648 aa20.2■□□□□ 0.82
TRAM1-203ENST00000520700 FKTNO75072 461 aa20.2■□□□□ 0.82
TRAM1-203ENST00000520700 CTCFP49711 727 aaPredicted RBP20.2■□□□□ 0.82
TRAM1-203ENST00000520700 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
TRAM1-203ENST00000520700 MROH8Q9H579 483 aa20.2■□□□□ 0.82
TRAM1-203ENST00000520700 HSPA8P11142 646 aaKnown RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 MAPK4P31152 587 aa20.19■□□□□ 0.82
TRAM1-203ENST00000520700 CCT2P78371 535 aaKnown RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 LACTBP83111 547 aaPredicted RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 SCRN1Q12765 414 aa20.19■□□□□ 0.82
TRAM1-203ENST00000520700 CDC37Q16543 378 aaPredicted RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 QRICH1Q2TAL8 776 aa20.19■□□□□ 0.82
TRAM1-203ENST00000520700 CPLX2Q6PUV4 134 aaKnown RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 GTF3C6Q969F1 213 aa20.19■□□□□ 0.82
TRAM1-203ENST00000520700 RRP36Q96EU6 259 aaKnown RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 RAVER2Q9HCJ3 691 aaKnown RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 VAT1LQ9HCJ6 419 aa20.19■□□□□ 0.82
TRAM1-203ENST00000520700 RBM27Q9P2N5 1060 aaKnown RBP20.19■□□□□ 0.82
TRAM1-203ENST00000520700 PRPF3O43395 683 aaKnown RBP20.18■□□□□ 0.82
TRAM1-203ENST00000520700 PEX10O60683 326 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 GNRH1P01148 92 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 ARHGEF6Q15052 776 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 CHST13Q8NET6 341 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 ZNF296Q8WUU4 475 aaPredicted RBP20.18■□□□□ 0.82
TRAM1-203ENST00000520700 SNX21Q969T3 373 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 ERO1AQ96HE7 468 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 PIGSQ96S52 555 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 NCOA5Q9HCD5 579 aaKnown RBP20.18■□□□□ 0.82
TRAM1-203ENST00000520700 CNTNAP5Q8WYK1 1306 aa20.18■□□□□ 0.82
TRAM1-203ENST00000520700 STRNO43815 780 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 LARGE1O95461 756 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 STK3Q13188 491 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 KIF22Q14807 665 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 SNRNP48Q6IEG0 339 aaKnown RBP20.17■□□□□ 0.82
TRAM1-203ENST00000520700 FBXO11Q86XK2 927 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 ABRAQ8N0Z2 381 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 CPXCR1Q8N123 301 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 CMTR1Q8N1G2 835 aaKnown RBP20.17■□□□□ 0.82
TRAM1-203ENST00000520700 AGBL1Q96MI9 1066 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 AMNQ9BXJ7 453 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 RNF26Q9BY78 433 aaPredicted RBP20.17■□□□□ 0.82
TRAM1-203ENST00000520700 FBXO40Q9UH90 709 aa20.17■□□□□ 0.82
TRAM1-203ENST00000520700 CPLX1O14810 134 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 CDKL5O76039 1030 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 CD2BP2O95400 341 aaKnown RBP20.16■□□□□ 0.82
TRAM1-203ENST00000520700 ERCC3P19447 782 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 SNAP25P60880 206 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 PLS1Q14651 629 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 CCDC174Q6PII3 467 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 RGS22Q8NE09 1264 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 PORCNQ9H237 461 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 TSKSQ9UJT2 592 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 CCPG1Q9ULG6 757 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 RIPK3Q9Y572 518 aa20.16■□□□□ 0.82
TRAM1-203ENST00000520700 V9GY48 417 aaPredicted RBP20.16■□□□□ 0.82
TRAM1-203ENST00000520700 hCG_1984214I3L0E3 225 aa20.15■□□□□ 0.82
TRAM1-203ENST00000520700 PPP1R11O60927 126 aaPredicted RBP20.15■□□□□ 0.82
TRAM1-203ENST00000520700 FCGRTP55899 365 aa20.15■□□□□ 0.82
TRAM1-203ENST00000520700 TEX2Q8IWB9 1127 aa20.15■□□□□ 0.82
TRAM1-203ENST00000520700 CCDC82Q8N4S0 544 aa20.15■□□□□ 0.82
TRAM1-203ENST00000520700 SAMD3Q8N6K7 520 aa20.15■□□□□ 0.82
TRAM1-203ENST00000520700 ZNF713Q8N859 430 aaPredicted RBP20.15■□□□□ 0.82
TRAM1-203ENST00000520700 LLPHQ9BRT6 129 aaKnown RBP20.15■□□□□ 0.82
TRAM1-203ENST00000520700 EFCC1Q9HA90 598 aa20.15■□□□□ 0.82
TRAM1-203ENST00000520700 SEC63Q9UGP8 760 aaKnown RBP20.15■□□□□ 0.82
TRAM1-203ENST00000520700 ABCB11O95342 1321 aa20.15■□□□□ 0.82
TRAM1-203ENST00000520700 BAZ2BQ9UIF8 2168 aaKnown RBP20.14■□□□□ 0.81
TRAM1-203ENST00000520700 FMNL1O95466 1100 aaPredicted RBP20.14■□□□□ 0.81
TRAM1-203ENST00000520700 CTGFP29279 349 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 PSMC4P43686 418 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 NOL8Q76FK4 1167 aaKnown RBP20.14■□□□□ 0.81
TRAM1-203ENST00000520700 PLEKHH3Q7Z736 793 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 HOMER1Q86YM7 354 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 CCAR1Q8IX12 1150 aaKnown RBP20.14■□□□□ 0.81
TRAM1-203ENST00000520700 NECAB1Q8N987 351 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 TMX3Q96JJ7 454 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 TRERF1Q96PN7 1200 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
TRAM1-203ENST00000520700 COL11A1P12107 1806 aaPredicted RBP20.13■□□□□ 0.81
TRAM1-203ENST00000520700 STK36Q9NRP7 1315 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 CTDNEP1O95476 244 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 PTPREP23469 700 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 GHRHRQ02643 423 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 SSRP1Q08945 709 aaKnown RBP20.13■□□□□ 0.81
TRAM1-203ENST00000520700 ST3GAL1Q11201 340 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 PKN1Q16512 942 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 PFKFB3Q16875 520 aaPredicted RBP20.13■□□□□ 0.81
TRAM1-203ENST00000520700 GPR142Q7Z601 462 aa20.13■□□□□ 0.81
TRAM1-203ENST00000520700 NCAPG2Q86XI2 1143 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms