RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.91
CTHRC1-203ENST00000520337 PSME4Q14997 1843 aa9.4□□□□□ -0.91
CTHRC1-203ENST00000520337 MAST2Q6P0Q8 1798 aa9.4□□□□□ -0.91
CTHRC1-203ENST00000520337 ZNF532Q9HCE3 1301 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 FER1L6Q2WGJ9 1857 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 A0A0G2JLW4 131 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 FOXP2O15409 715 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 IL1R1P14778 569 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 DEKP35659 375 aaKnown RBP9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 ANAPC15P60006 121 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 LRRFIP1Q32MZ4 808 aaKnown RBP9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 ZSCAN25Q6NSZ9 544 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 BTLAQ7Z6A9 289 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 ZNF384Q8TF68 577 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 PUS7LQ9H0K6 701 aaKnown RBP9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 CD209Q9NNX6 404 aa9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 BAZ2AQ9UIF9 1905 aaKnown RBP9.39□□□□□ -0.91
CTHRC1-203ENST00000520337 POLD1P28340 1107 aa9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 TGFB2P61812 414 aa9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 MAP3K12Q12852 859 aa9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 VPS53Q5VIR6 699 aa9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 DPP8Q6V1X1 898 aaPredicted RBP9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 ZNF804AQ7Z570 1209 aa9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 MAGEB6Q8N7X4 407 aa9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 RTFDC1Q9BY42 306 aaPredicted RBP9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 RBM8AQ9Y5S9 174 aaKnown RBP9.38□□□□□ -0.91
CTHRC1-203ENST00000520337 SALL1Q9NSC2 1324 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 SPDYE3A6NKU9 549 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 TGFBR3LH3BV60 316 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 HSPD1P10809 573 aaKnown RBP9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 MCCP23508 829 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 CHAF1AQ13111 956 aaPredicted RBP9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 RABEP1Q15276 862 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 CREB3L3Q68CJ9 461 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 ADGRA1Q86SQ6 560 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 TTLL6Q8N841 843 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 SNX21Q969T3 373 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 STRBPQ96SI9 672 aaKnown RBP9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 DSCC1Q9BVC3 393 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 COA1Q9GZY4 146 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 PRDM6Q9NQX0 595 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 LRP2BPQ9P2M1 347 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 ABCF2Q9UG63 623 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 JAG2Q9Y219 1238 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 SNX14Q9Y5W7 946 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 ARFGEF1Q9Y6D6 1849 aa9.37□□□□□ -0.91
CTHRC1-203ENST00000520337 FAM205AQ6ZU69 1335 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 SLC27A2O14975 620 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 GPAA1O43292 621 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 FRAT2O75474 233 aaPredicted RBP9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 MECOMQ03112 1051 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 GRIK5Q16478 980 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 WDR66Q8TBY9 1149 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 NSUN4Q96CB9 384 aaKnown RBP9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 TMX4Q9H1E5 349 aaPredicted RBP9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 RAI14Q9P0K7 980 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 CD2APQ9Y5K6 639 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 TAF6LQ9Y6J9 622 aa9.36□□□□□ -0.91
CTHRC1-203ENST00000520337 IGSF3O75054 1194 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 CYP7A1P22680 504 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 PRDX5P30044 214 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 WEE1P30291 646 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 ADH7P40394 386 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
CTHRC1-203ENST00000520337 ECM29Q5VYK3 1845 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 MBD4O95243 580 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 FGAP02671 866 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 SPATA31C1P0DKV0 1188 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 EPB42P16452 691 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 COL9A3Q14050 684 aaPredicted RBP9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 ALX1Q15699 326 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 ADCK5Q3MIX3 580 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 SPTY2D1Q68D10 685 aaPredicted RBP9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 TTLL5Q6EMB2 1281 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 NAA16Q6N069 864 aaPredicted RBP9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 TMED8Q6PL24 325 aaPredicted RBP9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 LCORLQ8N3X6 602 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 ZGPATQ8N5A5 531 aaKnown RBP9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 EYA3Q99504 573 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 TM6SF1Q9BZW5 370 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 ARMT1Q9H993 441 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 PIM2Q9P1W9 311 aa9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 RPAP1Q9BWH6 1393 aaPredicted RBP9.34□□□□□ -0.91
CTHRC1-203ENST00000520337 MYH1P12882 1939 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 ADAMTSL1Q8N6G6 1762 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 GSG1L2A8MUP6 293 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 PRKAB2O43741 272 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 LDHBP07195 334 aaKnown RBP9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 CYP21A2P08686 494 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 NEK4P51957 841 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 KIAA2012Q0VF49 1180 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 BECN1Q14457 450 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
CTHRC1-203ENST00000520337 RTKN2Q8IZC4 609 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms