RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 C6orf15Q6UXA7 325 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 LRP10Q7Z4F1 713 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 TSPYL5Q86VY4 417 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 ZNF655Q8N720 491 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 UBE2FQ969M7 185 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 KIRREL1Q96J84 757 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 KLHL25Q9H0H3 589 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 EPN3Q9H201 632 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 GP6Q9HCN6 339 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 WHRNQ9P202 907 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 ZSWIM5Q9P217 1185 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 SMG5Q9UPR3 1016 aaKnown RBP5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 SHOXO15266 292 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 PPM1BO75688 479 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 ITGA4P13612 1032 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 GAB4Q2WGN9 574 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 NOL9Q5SY16 702 aaKnown RBP5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 DCAF15Q66K64 600 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 EEPD1Q7L9B9 569 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 CELF2-AS1Q8N7Q2 184 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 MKL1Q969V6 931 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 DIRC2Q96SL1 478 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 DNAJC2Q99543 621 aaKnown RBP5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 APBA2Q99767 749 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 CCDC113Q9H0I3 377 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 PRDM7Q9NQW5 492 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 CHST7Q9NS84 486 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 USP35Q9P2H5 1018 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 DIS3Q9Y2L1 958 aaKnown RBP5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 ZNF451Q9Y4E5 1061 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 FHOD1Q9Y613 1164 aa5.06□□□□□ -1.6
HMGB1P41-201ENST00000520234 CBFA2T2O43439 604 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 GJB6O95452 261 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 PRAMEF1O95521 474 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 EPHX1P07099 455 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 BMP7P18075 431 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 TPP2P29144 1249 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 ZNF445P59923 1031 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 SERINC3Q13530 473 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 SNW1Q13573 536 aaKnown RBP5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 ZXDCQ2QGD7 858 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 TMC3Q7Z5M5 1100 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 MICAL1Q8TDZ2 1067 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 ZNF669Q96BR6 464 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 RCC1LQ96I51 464 aaKnown RBP5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 KCNC2Q96PR1 638 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 HDAC8Q9BY41 377 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 ATP13A1Q9HD20 1204 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 FAM86C1Q9NVL1 165 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 GFOD1Q9NXC2 390 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 SF3B6Q9Y3B4 125 aaKnown RBP5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 MSRB2Q9Y3D2 182 aa5.05□□□□□ -1.6
HMGB1P41-201ENST00000520234 SHISA3A0PJX4 238 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 ETV2O00321 342 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 GSNP06396 782 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 ENDOUP21128 410 aaKnown RBP5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 IKZF1Q13422 519 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 ERICH6BQ5W0A0 696 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 RNF111Q6ZNA4 994 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 ADAT2Q7Z6V5 191 aaKnown RBP5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 CRACR2BQ8N4Y2 399 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 ST13P5Q8NFI4 369 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 PMFBP1Q8TBY8 1022 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 DSCC1Q9BVC3 393 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 IRF2BPLQ9H1B7 796 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 EPB41L4BQ9H329 900 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 ST7Q9NRC1 585 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 SUSD2Q9UGT4 822 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 DUSP13Q9UII6 198 aa5.04□□□□□ -1.6
HMGB1P41-201ENST00000520234 B2RBV5 119 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 OVOL3O00110 214 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 SUSD5O60279 629 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 CELA3BP08861 270 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 PCBP3P57721 371 aaKnown RBP5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 ZP2Q05996 745 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 RASGRF1Q13972 1273 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 NFE2L2Q16236 605 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 CWF19L1Q69YN2 538 aaKnown RBP5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 MRM1Q6IN84 353 aaKnown RBP5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 POMZP3Q6PJE2 187 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 CREG2Q8IUH2 290 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 ARHGEF39Q8N4T4 335 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 FIBCD1Q8N539 461 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 LINC00116Q8NCU8 138 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 TCTN2Q96GX1 697 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 OSBPL2Q9H1P3 480 aa5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 DCP1AQ9NPI6 582 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P41-201ENST00000520234 SSU72P8A0A1W2PR75 194 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 IQCA1LA6NCM1 817 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 AGRPO00253 132 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 NOP56O00567 594 aaKnown RBP5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 PDPK1O15530 556 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 ESR1P03372 595 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 LTKP29376 864 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 BMP8BP34820 402 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 NOP2P46087 812 aaKnown RBP5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 GRB10Q13322 594 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 USHBP1Q8N6Y0 703 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 ZNF513Q8N8E2 541 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 BVESQ8NE79 360 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms