RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 C4orf32Q8N8J7 132 aa30.66■■■□□ 2.5
COL13A1-212ENST00000520133 TBC1D12O60347 775 aa30.66■■■□□ 2.5
COL13A1-212ENST00000520133 LONP1P36776 959 aaKnown RBP30.66■■■□□ 2.5
COL13A1-212ENST00000520133 POSTNQ15063 836 aa30.66■■■□□ 2.5
COL13A1-212ENST00000520133 DPCR1Q3MIW9 517 aa30.66■■■□□ 2.5
COL13A1-212ENST00000520133 GMCL1Q96IK5 515 aa30.66■■■□□ 2.5
COL13A1-212ENST00000520133 USP17L10C9JJH3 530 aa30.65■■■□□ 2.5
COL13A1-212ENST00000520133 AP5Z1O43299 807 aa30.65■■■□□ 2.5
COL13A1-212ENST00000520133 MDM2Q00987 491 aaPredicted RBP30.65■■■□□ 2.5
COL13A1-212ENST00000520133 ACTN4O43707 911 aaKnown RBP30.64■■■□□ 2.5
COL13A1-212ENST00000520133 PTGER2P43116 358 aa30.64■■■□□ 2.5
COL13A1-212ENST00000520133 TNNI2P48788 182 aa30.64■■■□□ 2.5
COL13A1-212ENST00000520133 ORC2Q13416 577 aaPredicted RBP30.64■■■□□ 2.5
COL13A1-212ENST00000520133 RRP1BQ14684 758 aaKnown RBP30.64■■■□□ 2.5
COL13A1-212ENST00000520133 NEK8Q86SG6 692 aa30.64■■■□□ 2.5
COL13A1-212ENST00000520133 DHX40Q8IX18 779 aaKnown RBP30.63■■■□□ 2.49
COL13A1-212ENST00000520133 TMEM39BQ9GZU3 492 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 ARHGEF10LQ9HCE6 1279 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 BIN2Q9UBW5 565 aaPredicted RBP30.63■■■□□ 2.49
COL13A1-212ENST00000520133 PCDHA5Q9Y5H7 936 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 JAG1P78504 1218 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 NBPF9Q3BBW0 867 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 DTHD1Q6ZMT9 781 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 ZSCAN30Q86W11 494 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 DHX58Q96C10 678 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 RIC8AQ9NPQ8 531 aa30.63■■■□□ 2.49
COL13A1-212ENST00000520133 PSDA5PKW4 1024 aaPredicted RBP30.62■■■□□ 2.49
COL13A1-212ENST00000520133 SLFN14P0C7P3 912 aa30.62■■■□□ 2.49
COL13A1-212ENST00000520133 TXLNAP40222 546 aa30.62■■■□□ 2.49
COL13A1-212ENST00000520133 PRPHP41219 470 aa30.62■■■□□ 2.49
COL13A1-212ENST00000520133 ZNF280AP59817 542 aaPredicted RBP30.62■■■□□ 2.49
COL13A1-212ENST00000520133 JAKMIP3Q5VZ66 844 aa30.62■■■□□ 2.49
COL13A1-212ENST00000520133 UPF1Q92900 1129 aaKnown RBP eCLIP30.62■■■□□ 2.49
COL13A1-212ENST00000520133 NDUFB10O96000 172 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 MRPL12P52815 198 aaKnown RBP30.61■■■□□ 2.49
COL13A1-212ENST00000520133 CUL5Q93034 780 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 GLT8D2Q9H1C3 349 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 PPP1R11O60927 126 aaPredicted RBP30.61■■■□□ 2.49
COL13A1-212ENST00000520133 IL17AQ16552 155 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 LETM2Q2VYF4 491 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 AOPEPQ8N6M6 819 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 TBCKQ8TEA7 893 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 TRIM5Q9C035 493 aa30.61■■■□□ 2.49
COL13A1-212ENST00000520133 CCNT1O60563 726 aaKnown RBP30.6■■■□□ 2.49
COL13A1-212ENST00000520133 BMP3P12645 472 aa30.6■■■□□ 2.49
COL13A1-212ENST00000520133 TNFAIP1Q13829 316 aa30.6■■■□□ 2.49
COL13A1-212ENST00000520133 NT5DC1Q5TFE4 455 aa30.6■■■□□ 2.49
COL13A1-212ENST00000520133 IQUBQ8NA54 791 aa30.6■■■□□ 2.49
COL13A1-212ENST00000520133 SMARCE1Q969G3 411 aa30.6■■■□□ 2.49
COL13A1-212ENST00000520133 ZBTB21Q9ULJ3 1066 aa30.6■■■□□ 2.49
COL13A1-212ENST00000520133 A0A087X0B3 334 aa30.59■■■□□ 2.49
COL13A1-212ENST00000520133 FOXN1O15353 648 aa30.59■■■□□ 2.49
COL13A1-212ENST00000520133 QRICH1Q2TAL8 776 aa30.59■■■□□ 2.49
COL13A1-212ENST00000520133 SARM1Q6SZW1 724 aa30.59■■■□□ 2.49
COL13A1-212ENST00000520133 SMTNL1A8MU46 457 aa30.59■■■□□ 2.49
COL13A1-212ENST00000520133 CDC37Q16543 378 aaPredicted RBP30.59■■■□□ 2.49
COL13A1-212ENST00000520133 DPF2Q92785 391 aa30.59■■■□□ 2.49
COL13A1-212ENST00000520133 TMEM260Q9NX78 707 aa30.59■■■□□ 2.49
COL13A1-212ENST00000520133 SMC2O95347 1197 aa30.58■■■□□ 2.49
COL13A1-212ENST00000520133 TPM4P67936 248 aa30.58■■■□□ 2.49
COL13A1-212ENST00000520133 RASSF7Q02833 373 aa30.58■■■□□ 2.49
COL13A1-212ENST00000520133 ISM2Q6H9L7 571 aa30.58■■■□□ 2.49
COL13A1-212ENST00000520133 TRIML1Q8N9V2 468 aa30.58■■■□□ 2.49
COL13A1-212ENST00000520133 TMEM60Q9H2L4 133 aa30.58■■■□□ 2.49
COL13A1-212ENST00000520133 A0A1W2PRG0 241 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 GOLGA6L6A8MZA4 724 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 FZD9O00144 591 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 NEMFO60524 1076 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 MSNP26038 577 aaKnown RBP30.57■■■□□ 2.48
COL13A1-212ENST00000520133 IKQ13123 557 aaPredicted RBP30.57■■■□□ 2.48
COL13A1-212ENST00000520133 PSTPIP2Q9H939 334 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 GOPCQ9HD26 462 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 TMX2Q9Y320 296 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 SHTN1A0MZ66 631 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 OR52Z1P0C646 297 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 PGAP2Q9UHJ9 254 aa30.57■■■□□ 2.48
COL13A1-212ENST00000520133 SARSP49591 514 aaKnown RBP30.56■■■□□ 2.48
COL13A1-212ENST00000520133 ZNF75DP51815 510 aa30.56■■■□□ 2.48
COL13A1-212ENST00000520133 MAP3K10Q02779 954 aa30.56■■■□□ 2.48
COL13A1-212ENST00000520133 SYDE2Q5VT97 1194 aa30.56■■■□□ 2.48
COL13A1-212ENST00000520133 MIGA2Q7L4E1 593 aa30.56■■■□□ 2.48
COL13A1-212ENST00000520133 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.56■■■□□ 2.48
COL13A1-212ENST00000520133 SH3RF1Q7Z6J0 888 aa30.56■■■□□ 2.48
COL13A1-212ENST00000520133 PLA2G4DQ86XP0 818 aa30.56■■■□□ 2.48
COL13A1-212ENST00000520133 PCDHA1Q9Y5I3 950 aa30.56■■■□□ 2.48
COL13A1-212ENST00000520133 TMEM232C9JQI7 657 aa30.55■■■□□ 2.48
COL13A1-212ENST00000520133 PRR29P0C7W0 189 aa30.55■■■□□ 2.48
COL13A1-212ENST00000520133 CAP2P40123 477 aa30.55■■■□□ 2.48
COL13A1-212ENST00000520133 CLK2P49760 499 aaKnown RBP30.55■■■□□ 2.48
COL13A1-212ENST00000520133 GMPSP49915 693 aaPredicted RBP30.55■■■□□ 2.48
COL13A1-212ENST00000520133 BTNL9Q6UXG8 535 aa30.55■■■□□ 2.48
COL13A1-212ENST00000520133 PAGE5Q96GU1 130 aa30.55■■■□□ 2.48
COL13A1-212ENST00000520133 NUP88Q99567 741 aaPredicted RBP30.55■■■□□ 2.48
COL13A1-212ENST00000520133 SH2D4AQ9H788 454 aa30.55■■■□□ 2.48
COL13A1-212ENST00000520133 RRAGDQ9NQL2 400 aaPredicted RBP30.55■■■□□ 2.48
COL13A1-212ENST00000520133 IKBKBO14920 756 aa30.54■■■□□ 2.48
COL13A1-212ENST00000520133 RASA3Q14644 834 aa30.54■■■□□ 2.48
COL13A1-212ENST00000520133 CDAN1Q8IWY9 1227 aa30.54■■■□□ 2.48
COL13A1-212ENST00000520133 MICALL2Q8IY33 904 aa30.54■■■□□ 2.48
COL13A1-212ENST00000520133 SPATA20Q8TB22 786 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms