RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 THOC1Q96FV9 657 aaKnown RBP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 ANGPTL2Q9UKU9 493 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 DENND2AQ9ULE3 1009 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 A2MP01023 1474 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 RNMTO43148 476 aaKnown RBP9.52□□□□□ -0.89
CSMD1-206ENST00000520002 CROCCP2Q86T23 111 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 PPP4R1Q8TF05 950 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 HVCN1Q96D96 273 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 ZBTB10Q96DT7 871 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 ABCB6Q9NP58 842 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
CSMD1-206ENST00000520002 GIPC1O14908 333 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 PPP1R12AO14974 1030 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 THAP12O43422 761 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 HDLBPQ00341 1268 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 SNRNP27Q8WVK2 155 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 INTS9Q9NV88 658 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 PAIP2BQ9ULR5 123 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 PHLPP2Q6ZVD8 1323 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 EEF1B2P24534 225 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 DIS3L2Q8IYB7 885 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 SNX29Q8TEQ0 813 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 RAB17Q9H0T7 212 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 KDM1AO60341 852 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 RBM17Q96I25 401 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 RPGRIP1Q96KN7 1286 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 LSM14BQ9BX40 385 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 SH2D4AQ9H788 454 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 GFAPP14136 432 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 REXO1Q8N1G1 1221 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 TEKT1Q969V4 418 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 NUP58Q9BVL2 599 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 ELF1P32519 619 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 OLFML2BQ68BL8 750 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 SLC1A4P43007 532 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 STAMQ92783 540 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 COBLO75128 1261 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 SLCO1A2P46721 670 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 CASP8Q14790 479 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 GRAMD1BQ3KR37 738 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 MLKLQ8NB16 471 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 SEPT8Q92599 483 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 DBNDD2Q9BQY9 259 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 NR1D1P20393 614 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 DYMQ7RTS9 669 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 GSPT2Q8IYD1 628 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 MYO9BQ13459 2157 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 PPP1R2P41236 205 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 EYA3Q99504 573 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 CDC23Q9UJX2 597 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 MAN1A1P33908 653 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 LONP1P36776 959 aaKnown RBP9.51□□□□□ -0.89
CSMD1-206ENST00000520002 KLHL30Q0D2K2 578 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 NBPF20Q3BBV1 942 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
CSMD1-206ENST00000520002 PTPRKQ15262 1439 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 EXOC3O60645 756 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 LRRC8CQ8TDW0 803 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-206ENST00000520002 EYA2O00167 538 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 ATP8B1O43520 1251 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 TAF5LO75529 589 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 PDCD2Q16342 344 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-206ENST00000520002 NAA35Q5VZE5 725 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 KRT40Q6A162 431 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 HAUS2Q9NVX0 235 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 MYO1AQ9UBC5 1043 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 KCNJ18B7U540 433 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 SGSM2O43147 1006 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 KRT19P08727 400 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 KCNJ12Q14500 433 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 USP28Q96RU2 1077 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 VPS54Q9P1Q0 977 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 EYA1Q99502 592 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 BCAP29Q9UHQ4 241 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 SLC7A5Q01650 507 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 SLC30A9Q6PML9 568 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 IFT122Q9HBG6 1241 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 ZNF518AQ6AHZ1 1483 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 EVI5O60447 810 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 36
CSMD1-206ENST00000520002 DNM3Q9UQ16 869 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 CDC25BP30305 580 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 CTAGE3PQ8IX95 158 aa9.5□□□□□ -0.89
CSMD1-206ENST00000520002 TAB3Q8N5C8 712 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-206ENST00000520002 IL1RL1Q01638 556 aa9.49□□□□□ -0.89
CSMD1-206ENST00000520002 NACA2Q9H009 215 aa9.49□□□□□ -0.89
CSMD1-206ENST00000520002 OTUD6AQ7L8S5 288 aa9.49□□□□□ -0.89
CSMD1-206ENST00000520002 BCRP11274 1271 aa9.49□□□□□ -0.89
CSMD1-206ENST00000520002 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
CSMD1-206ENST00000520002 LRWD1Q9UFC0 647 aa9.49□□□□□ -0.89
CSMD1-206ENST00000520002 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms