RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 KCNJ14Q9UNX9 436 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 PTPRFP10586 1907 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 PPP2R5BQ15173 497 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 RCSD1Q6JBY9 416 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 SIAH1Q8IUQ4 282 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 CEP95Q96GE4 821 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 GOLPH3LQ9H4A5 285 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 SH2D4AQ9H788 454 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 ZCCHC17Q9NP64 241 aaKnown RBP9.16□□□□□ -0.94
CLK4-203ENST00000519583 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 hCG_1642624A0A1W2PR95 340 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 CALM1P0DP23 149 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 CALM2P0DP24 149 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 CALM3P0DP25 149 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 CYP2C8P10632 490 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 FUT2Q10981 343 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 SF3A1Q15459 793 aaKnown RBP9.16□□□□□ -0.94
CLK4-203ENST00000519583 ANO1Q5XXA6 986 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 ANP32BQ92688 251 aaKnown RBP9.16□□□□□ -0.94
CLK4-203ENST00000519583 PARK7Q99497 189 aaKnown RBP9.16□□□□□ -0.94
CLK4-203ENST00000519583 FUCA2Q9BTY2 467 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 TNMDQ9H2S6 317 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 CLSTN2Q9H4D0 955 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 IL17RBQ9NRM6 502 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 RBM28Q9NW13 759 aaKnown RBP9.16□□□□□ -0.94
CLK4-203ENST00000519583 PCDHA7Q9UN72 937 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 MYH15Q9Y2K3 1946 aa9.16□□□□□ -0.94
CLK4-203ENST00000519583 YEATS4O95619 227 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 MMP1P03956 469 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 AKAP17AQ02040 695 aaKnown RBP9.15□□□□□ -0.94
CLK4-203ENST00000519583 PABPC4Q13310 644 aaKnown RBP eCLIP9.15□□□□□ -0.94
CLK4-203ENST00000519583 RNF26Q9BY78 433 aaPredicted RBP9.15□□□□□ -0.94
CLK4-203ENST00000519583 CLIP2Q9UDT6 1046 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 TMX2Q9Y320 296 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 IGKV6D-41A0A0C4DH26 115 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 SPTLC2O15270 562 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 U2AF2P26368 475 aaKnown RBP eCLIP9.15□□□□□ -0.941e-7■□□□□ 8
CLK4-203ENST00000519583 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 CKAP2LQ8IYA6 745 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 DIS3L2Q8IYB7 885 aaKnown RBP9.15□□□□□ -0.94
CLK4-203ENST00000519583 SPICE1Q8N0Z3 855 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 FSIP1Q8NA03 581 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 CTCFLQ8NI51 663 aaPredicted RBP9.15□□□□□ -0.94
CLK4-203ENST00000519583 SMCR8Q8TEV9 937 aaPredicted RBP9.15□□□□□ -0.94
CLK4-203ENST00000519583 C12orf42Q96LP6 360 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 MTMR4Q9NYA4 1195 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 STX8Q9UNK0 236 aa9.15□□□□□ -0.94
CLK4-203ENST00000519583 BTBD18B2RXH4 712 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 GPR25O00155 361 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 TTLL1O95922 423 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 VCAM1P19320 739 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 OSBPP22059 807 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 IRX3P78415 501 aaPredicted RBP9.15□□□□□ -0.95
CLK4-203ENST00000519583 SAFBQ15424 915 aaKnown RBP eCLIP9.15□□□□□ -0.95
CLK4-203ENST00000519583 CCDC73Q6ZRK6 1079 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 KCNG4Q8TDN1 519 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 VCPKMTQ9H867 229 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 KAT14Q9H8E8 782 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 NYAP2Q9P242 653 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 SLC45A1Q9Y2W3 748 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.95
CLK4-203ENST00000519583 PLIN4Q96Q06 1357 aa9.15□□□□□ -0.95
CLK4-203ENST00000519583 CCDC173Q0VFZ6 552 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 PKN1Q16512 942 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 LRRC47Q8N1G4 583 aaKnown RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 SHISA4Q96DD7 197 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 ASCC2Q9H1I8 757 aaPredicted RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 CPA4Q9UI42 421 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 PRPF3O43395 683 aaKnown RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 TLR2O60603 784 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 KIAA1755Q5JYT7 1200 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 DGKHQ86XP1 1220 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 NOSTRINQ8IVI9 506 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 SRBD1Q8N5C6 995 aaKnown RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 ZNF296Q8WUU4 475 aaPredicted RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 RPAP3Q9H6T3 665 aaPredicted RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 VPS54Q9P1Q0 977 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 CNTNAP5Q8WYK1 1306 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 CCDC192P0DO97 292 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 ADALQ6DHV7 355 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 MRPS27Q92552 414 aaKnown RBP9.14□□□□□ -0.95
CLK4-203ENST00000519583 PPP1R9BQ96SB3 815 aa9.14□□□□□ -0.95
CLK4-203ENST00000519583 GREB1LQ9C091 1923 aaPredicted RBP9.13□□□□□ -0.95
CLK4-203ENST00000519583 LOC285556D6RIA3 1793 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L15C9J2P7 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L13C9JLJ4 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L11C9JVI0 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L18D6R9N7 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L22D6RA61 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L17D6RBQ6 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L19D6RCP7 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 USP17L20D6RJB6 530 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 FKTNO75072 461 aa9.13□□□□□ -0.95
CLK4-203ENST00000519583 MARCKSP29966 332 aaPredicted RBP9.13□□□□□ -0.95
CLK4-203ENST00000519583 HOXA7P31268 230 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms