RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 EHMT1Q9H9B1 1298 aa5.42□□□□□ -1.54
CSMD3-209ENST00000519485 SH3D21A4FU49 640 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 ANKRD33BA6NCL7 494 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 NUDT19A8MXV4 375 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 SRGAP3O43295 1099 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 CTSKP43235 329 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 HTRA3P83110 453 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 NUP43Q8NFH3 380 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 FBXO27Q8NI29 283 aa5.41□□□□□ -1.54
CSMD3-209ENST00000519485 GZF1Q9H116 711 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-209ENST00000519485 F6X3S4 739 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 K7ESM1 405 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 CLEC3AO75596 197 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 CYBBP04839 570 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 VAV1P15498 845 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 FAM160A1Q05DH4 1040 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 OVOS1Q6IE37 1185 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 LIPIQ6XZB0 460 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 SAPCD2Q86UD0 394 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 TMEM52Q8NDY8 209 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 JMJD8Q96S16 334 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 RNF38Q9H0F5 515 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 IMPACTQ9P2X3 320 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 PCDHB14Q9Y5E9 798 aa5.4□□□□□ -1.54
CSMD3-209ENST00000519485 GREM1O60565 184 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 INSRRP14616 1297 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 NCKAP1LP55160 1127 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 MVKQ03426 396 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 PAQR3Q6TCH7 311 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 FNIP1Q8TF40 1166 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 ATG4CQ96DT6 458 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 GPR20Q99678 358 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 CDADC1Q9BWV3 514 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 SRRTQ9BXP5 876 aaKnown RBP5.39□□□□□ -1.55
CSMD3-209ENST00000519485 PALD1Q9ULE6 856 aa5.39□□□□□ -1.55
CSMD3-209ENST00000519485 MEIS3P2A8K0S8 358 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 POLR2BP30876 1174 aaKnown RBP5.38□□□□□ -1.55
CSMD3-209ENST00000519485 MAGEA10P43363 369 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-209ENST00000519485 CORO7P57737 925 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 ZNF200P98182 395 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-209ENST00000519485 XPCQ01831 940 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-209ENST00000519485 PUM1Q14671 1186 aaKnown RBP eCLIP5.38□□□□□ -1.55
CSMD3-209ENST00000519485 ZNF827Q17R98 1081 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 CCDC27Q2M243 656 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 NLRC3Q7RTR2 1065 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 ERMP1Q7Z2K6 904 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 REXO1Q8N1G1 1221 aaKnown RBP5.38□□□□□ -1.55
CSMD3-209ENST00000519485 BRMS1Q9HCU9 246 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 MINPP1Q9UNW1 487 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 PCDHB12Q9Y5F1 795 aa5.38□□□□□ -1.55
CSMD3-209ENST00000519485 C1QTNF3-AMACRE9PGA6 284 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 TNFRSF10CO14798 259 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 PLA2G1BP04054 148 aaKnown RBP5.37□□□□□ -1.55
CSMD3-209ENST00000519485 GSNP06396 782 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 DBHP09172 617 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 TNFRSF1AP19438 455 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 LIMS1P48059 325 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 DLX2Q07687 328 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-209ENST00000519485 RTP2Q5QGT7 225 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 UBXN11Q5T124 520 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 HLA-DQA1Q5Y7H0 255 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 FBXL19Q6PCT2 694 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 AP5S1Q9NUS5 200 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 GFOD1Q9NXC2 390 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 SUSD2Q9UGT4 822 aa5.37□□□□□ -1.55
CSMD3-209ENST00000519485 SUPT16HQ9Y5B9 1047 aaKnown RBP5.37□□□□□ -1.55
CSMD3-209ENST00000519485 MINDY4BA8MYZ0 360 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 SORBS3O60504 671 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 ITGAEP38570 1179 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 FOXO4P98177 505 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 AUHQ13825 339 aaKnown RBP5.36□□□□□ -1.55
CSMD3-209ENST00000519485 LRRFIP1Q32MZ4 808 aaKnown RBP5.36□□□□□ -1.55
CSMD3-209ENST00000519485 NT5DC1Q5TFE4 455 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 CYP2R1Q6VVX0 501 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 FBXO33Q7Z6M2 555 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 TMEM192Q8IY95 271 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 NLGN2Q8NFZ4 835 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 USP40Q9NVE5 1235 aa5.36□□□□□ -1.55
CSMD3-209ENST00000519485 TTBK1Q5TCY1 1321 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-209ENST00000519485 ZBTB7CA1YPR0 619 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 TLR3O15455 904 aaKnown RBP5.35□□□□□ -1.55
CSMD3-209ENST00000519485 NOBOXO60393 691 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 ITGB3P05106 788 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 ATF2P15336 505 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 NME1P15531 152 aaKnown RBP5.35□□□□□ -1.55
CSMD3-209ENST00000519485 ADAM17P78536 824 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 CRTC3Q6UUV7 619 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 ZNF512BQ96KM6 892 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-209ENST00000519485 RBM15Q96T37 977 aaKnown RBP eCLIP5.35□□□□□ -1.55
CSMD3-209ENST00000519485 C1QTNF3Q9BXJ4 246 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 SLC12A9Q9BXP2 914 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 MKRN2Q9H000 416 aaKnown RBP5.35□□□□□ -1.55
CSMD3-209ENST00000519485 PDLIM7Q9NR12 457 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 KBTBD4Q9NVX7 518 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 PMF1-BGLAPU3KQ54 211 aa5.35□□□□□ -1.55
CSMD3-209ENST00000519485 NCAM1P13591 858 aa5.34□□□□□ -1.55
CSMD3-209ENST00000519485 EIF4A3P38919 411 aaKnown RBP5.34□□□□□ -1.55
CSMD3-209ENST00000519485 LSRQ86X29 649 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-209ENST00000519485 TTC9BQ8N6N2 239 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms