RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 NOGQ13253 232 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 TRIM29Q14134 588 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 TSR1Q2NL82 804 aaKnown RBP8.35□□□□□ -1.07
MRPS28-205ENST00000519386 TATDN1Q6P1N9 297 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
MRPS28-205ENST00000519386 ERO1BQ86YB8 467 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 SCYL3Q8IZE3 742 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 OPTNQ96CV9 577 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 SPATA32Q96LK8 384 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 SWAP70Q9UH65 585 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 PHIPQ8WWQ0 1821 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 PTPRFP10586 1907 aa8.35□□□□□ -1.07
MRPS28-205ENST00000519386 XBP1P17861 261 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 PTPRAP18433 802 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 U2AF2P26368 475 aaKnown RBP eCLIP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 CAP2P40123 477 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 CDK8P49336 464 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 GNAQP50148 359 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 KIF23Q02241 960 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 PROX2Q3B8N5 592 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 ZSCAN23Q3MJ62 389 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 CERKLQ49MI3 558 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 CCDC183Q5T5S1 534 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 FOXD4L5Q5VV16 416 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 CAVIN1Q6NZI2 390 aaKnown RBP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 NBPF11Q86T75 865 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 FERMT3Q86UX7 667 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 CTCFLQ8NI51 663 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 NKX2-3Q8TAU0 364 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 LEO1Q8WVC0 666 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 FOXD4L4Q8WXT5 416 aaPredicted RBP8.34□□□□□ -1.07
MRPS28-205ENST00000519386 SENP2Q9HC62 589 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
MRPS28-205ENST00000519386 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 PCNTO95613 3336 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 IRF6O14896 467 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
MRPS28-205ENST00000519386 GH2P01242 217 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 ASNSP08243 561 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 ZBTB48P10074 688 aaPredicted RBP8.33□□□□□ -1.08
MRPS28-205ENST00000519386 RASA1P20936 1047 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 SMARCA1P28370 1054 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
MRPS28-205ENST00000519386 MAP2K2P36507 400 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 NASPP49321 788 aaPredicted RBP8.33□□□□□ -1.08
MRPS28-205ENST00000519386 PPATQ06203 517 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 FUT2Q10981 343 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 PPIL2Q13356 520 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 ABCB5Q2M3G0 1257 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 RCSD1Q6JBY9 416 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 TMTC3Q6ZXV5 915 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 NEDD1Q8NHV4 660 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 KCNG4Q8TDN1 519 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 LZTS2Q9BRK4 669 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 ALG1Q9BT22 464 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
MRPS28-205ENST00000519386 MKNK2Q9HBH9 465 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 RTEL1Q9NZ71 1219 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 TMEM63CQ9P1W3 806 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 RCOR1Q9UKL0 485 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 ZBTB21Q9ULJ3 1066 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 ZHX2Q9Y6X8 837 aa8.33□□□□□ -1.08
MRPS28-205ENST00000519386 A0A1W2PQ27 194 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 A0A1W2PQ64 194 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 A0A1W2PQD8 194 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 GOLGA6L4A6NEF3 574 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 MANSC4A6NHS7 340 aaPredicted RBP8.32□□□□□ -1.08
MRPS28-205ENST00000519386 USP17L5A8MUK1 530 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 MPHOSPH10O00566 681 aaKnown RBP8.32□□□□□ -1.08
MRPS28-205ENST00000519386 PRDM1O75626 825 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 MMP1P03956 469 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 TSPY3P0CV98 308 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 TSPY8P0CW00 308 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 AKR1B1P15121 316 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 GUCY1A2P33402 732 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 MLLT3P42568 568 aaPredicted RBP8.32□□□□□ -1.08
MRPS28-205ENST00000519386 AKAP17AQ02040 695 aaKnown RBP8.32□□□□□ -1.08
MRPS28-205ENST00000519386 GRM4Q14833 912 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 SEPT2Q15019 361 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
MRPS28-205ENST00000519386 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 KRT40Q6A162 431 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 LRSAM1Q6UWE0 723 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 ZNF444Q8N0Y2 327 aaPredicted RBP8.32□□□□□ -1.08
MRPS28-205ENST00000519386 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 ZKSCAN3Q9BRR0 538 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 KAT14Q9H8E8 782 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 INCENPQ9NQS7 918 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 SH3GLB2Q9NR46 395 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 GINM1Q9NU53 330 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 DDX19AQ9NUU7 478 aaKnown RBP8.32□□□□□ -1.08
MRPS28-205ENST00000519386 RABGEF1Q9UJ41 708 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 SYNPO2Q9UMS6 1093 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 AFG3L2Q9Y4W6 797 aa8.32□□□□□ -1.08
MRPS28-205ENST00000519386 CCL15-CCL14A0A0B4J2E2 113 aa8.31□□□□□ -1.08
MRPS28-205ENST00000519386 TRIM75PA6NK02 468 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms