RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 FSIP1Q8NA03 581 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 ZNF280CQ8ND82 737 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 SPZ1Q9BXG8 430 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 CHADLQ6NUI6 762 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
CLN8-204ENST00000519254 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 PPP6R2O75170 966 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
CLN8-204ENST00000519254 KRT2P35908 639 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 CCDC73Q6ZRK6 1079 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 ADGRF4Q8IZF3 695 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 MRPS27Q92552 414 aaKnown RBP16.6■□□□□ 0.25
CLN8-204ENST00000519254 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.25
CLN8-204ENST00000519254 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
CLN8-204ENST00000519254 PIGSQ96S52 555 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 WDR18Q9BV38 432 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 SEC63Q9UGP8 760 aaKnown RBP16.6■□□□□ 0.25
CLN8-204ENST00000519254 PHIPQ8WWQ0 1821 aa16.6■□□□□ 0.25
CLN8-204ENST00000519254 CELF2O95319 508 aaKnown RBP16.59■□□□□ 0.25
CLN8-204ENST00000519254 RILPL1Q5EBL4 403 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 FMR1NBQ8N0W7 255 aaPredicted RBP16.59■□□□□ 0.25
CLN8-204ENST00000519254 RNF214Q8ND24 703 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.59■□□□□ 0.25
CLN8-204ENST00000519254 FAM205CA6NFA0 338 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 USP14P54578 494 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 HMGCS2P54868 508 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 BACE1P56817 501 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
CLN8-204ENST00000519254 HEATR3Q7Z4Q2 680 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 RIOX1Q9H6W3 641 aa16.59■□□□□ 0.25
CLN8-204ENST00000519254 A0A1B0GVL5 298 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 CMA1P23946 247 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 SMARCA1P28370 1054 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 NDUFA8P51970 172 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 STAT2P52630 851 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 TANGO6Q9C0B7 1094 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 SH3GLB2Q9NR46 395 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 EMILIN3Q9NT22 766 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 AFG3L2Q9Y4W6 797 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 PCDHB6Q9Y5E3 794 aa16.58■□□□□ 0.24
CLN8-204ENST00000519254 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
CLN8-204ENST00000519254 SNAP25P60880 206 aa16.57■□□□□ 0.24
CLN8-204ENST00000519254 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
CLN8-204ENST00000519254 SYDE2Q5VT97 1194 aa16.57■□□□□ 0.24
CLN8-204ENST00000519254 JMYQ8N9B5 988 aa16.57■□□□□ 0.24
CLN8-204ENST00000519254 LPAR1Q92633 364 aa16.57■□□□□ 0.24
CLN8-204ENST00000519254 GBA2Q9HCG7 927 aaPredicted RBP16.57■□□□□ 0.24
CLN8-204ENST00000519254 WDR46O15213 610 aaKnown RBP16.56■□□□□ 0.24
CLN8-204ENST00000519254 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 VCAM1P19320 739 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 NLRP5P59047 1200 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 WWC2Q6AWC2 1192 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 FBXO28Q9NVF7 368 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
CLN8-204ENST00000519254 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
CLN8-204ENST00000519254 TYRO3Q06418 890 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 CDC37Q16543 378 aaPredicted RBP16.56■□□□□ 0.24
CLN8-204ENST00000519254 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 ERO1BQ86YB8 467 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 CLIC6Q96NY7 704 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 RPAP3Q9H6T3 665 aaPredicted RBP16.56■□□□□ 0.24
CLN8-204ENST00000519254 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
CLN8-204ENST00000519254 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 IRF6O14896 467 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 CTAGE5O15320 804 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 CUTAO60888 179 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 PPATQ06203 517 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 LDLRAD1Q5T700 205 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 SHC4Q6S5L8 630 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 FEM1BQ9UK73 627 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 PRR12Q9ULL5 1215 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 MRVI1Q9Y6F6 885 aa16.55■□□□□ 0.24
CLN8-204ENST00000519254 PNMA6FA0A0J9YX94 578 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 FAM237AA0A1B0GTK4 181 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 STXBP3O00186 592 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 ZBTB5O15062 677 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 PFKFB1P16118 471 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 ATP2B1P20020 1258 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 CALML3P27482 149 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 RESP18Q5W5W9 173 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 BTNL9Q6UXG8 535 aa16.54■□□□□ 0.24
CLN8-204ENST00000519254 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms